Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo19g00130 ATGGATTTTGGGTTTGGCGAAGAGAGAGGTAAGATACCTTTTTCTTATTCTTCTTCCTCTTCCTCTCCTTCGTCTTCTTCGCAGTACAAAACGGCCAATCTGATGTCTCTAGGCAATAACCAGAGCTGGGAGTCTCATCTTTTCGATTACTACAAGCAGCAGCCGAGAGGGCTTGAGCTGACGGCCGGAAACGATGAAGAAGTAGTGAGAAGGTCTGGAGGTGCAGGTGGCCATGGAAGTAGCGCAAGCTTTTGTATGGAGAAAGAACACATGTTCGACAAGGTTGTCACTCCCAGCGACGTCGGAAAACTGAACCGGCTCGTAATTCCGAAACAGCACGCAGAAAAGTATTTTCCTCTTGATTCATCCACAAACGAGAAAGGTCTCCTCTTGAATTTCGAAGATCGGAATGGAAAGTCATGGCGATTTCGATACTCGTACTGGAATAGCAGCCAGAGCTACGTTATGACAAAAGGGTGGAGCCGGTTTGTGAAGGAGAAGAAGCTGGACGCCGGCGACATTGTTTCGTTCCAGCGTGGAGTTGGGGAGGCGGGAAAAGATCGTCTCTATATTGACTGGCAGCGCCACCCTGATGCGCCCCAACGGGTAGCCGCCCTAAATCCACACCAATTCTCTTTCCACCACCACCACCAGTCAATTCCCTGGAGCCCTTTGCTCTTCAGTTCCATGGCGGCTGCAACATCCTTGTCTTCCCCACGGGACCACTTGAACTTGTCGCACCTAAACAGCAATGTCATCCACAGAGGAAGCTCCGCCTGTTACGGCGGTATGGTAAACCCACACCCACACACCCCACCAAATTGCTCAAACGGATCAATTCTTTACTTCAGGTCGGCGCCGGTGGGATCACAAGGACAGCCCTTTGAGACGGCGGCTCACGTTCCATGTGGAGGTGGAGTGGAGCCGATGGTGTTTGATTCCGTTCCGGTTGACCATGGGAAAACGGCTGCTAAGAAACTCCGGTTGTTTGGTGTTAACATGGAATGCCCAGTGCCGGAATCAGACGGCCGCCAGGAGGCAAAATCTCATCTTTCGGGCAGTTTTTCTTCTTCTGATTCCCAACATTCTCTCCAACTGAGGCTCTATAACGGTACTCCAATGCCCACCCATTTTCTCAACGAAGACAACCCTACTACCATGTCCTTAAATTTCAACATTTGA 1182 50.51 MDFGFGEERGKIPFSYSSSSSSPSSSSQYKTANLMSLGNNQSWESHLFDYYKQQPRGLELTAGNDEEVVRRSGGAGGHGSSASFCMEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSTNEKGLLLNFEDRNGKSWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGEAGKDRLYIDWQRHPDAPQRVAALNPHQFSFHHHHQSIPWSPLLFSSMAAATSLSSPRDHLNLSHLNSNVIHRGSSACYGGMVNPHPHTPPNCSNGSILYFRSAPVGSQGQPFETAAHVPCGGGVEPMVFDSVPVDHGKTAAKKLRLFGVNMECPVPESDGRQEAKSHLSGSFSSSDSQHSLQLRLYNGTPMPTHFLNEDNPTTMSLNFNI 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 3745824 3747005 - BLOR09473 Blo19g00130 74271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo19g00130 393 Pfam B3 DNA binding domain 92 195 IPR003340 GO:0003677
Blo19g00130 393 MobiDBLite consensus disorder prediction 340 359 - -
Blo19g00130 393 MobiDBLite consensus disorder prediction 1 30 - -
Blo19g00130 393 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 62 361 - -
Blo19g00130 393 ProSiteProfiles B3 DNA-binding domain profile. 92 195 IPR003340 GO:0003677
Blo19g00130 393 CDD B3_DNA 90 179 IPR003340 GO:0003677
Blo19g00130 393 SUPERFAMILY DNA-binding pseudobarrel domain 89 183 IPR015300 -
Blo19g00130 393 SMART B3_2 92 197 IPR003340 GO:0003677
Blo19g00130 393 Gene3D - 85 205 IPR015300 -
Blo19g00130 393 MobiDBLite consensus disorder prediction 13 30 - -
Blo19g00130 393 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 62 361 IPR044800 GO:0003700
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g00788 Blo19g00130 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00258 Blo-Chr1:3310680 Blo19g00130 Blo-Chr19:3745824 7.11E-85 dispersed
Blo09g00482 Blo-Chr9:16048397 Blo19g00130 Blo-Chr19:3745824 1.56E-47 dispersed
Blo11g00830 Blo-Chr11:14148534 Blo19g00130 Blo-Chr19:3745824 1.77E-45 dispersed
Blo12g00198 Blo-Chr12:12940147 Blo19g00130 Blo-Chr19:3745824 7.31E-91 dispersed
Blo19g00130 Blo-Chr19:3745824 Blo08g00183 Blo-Chr8:2085505 2.05E-16 dispersed
Blo03g01003 Blo-Chr3:36316066 Blo19g00130 Blo-Chr19:3745824 4.84E-30 transposed
Blo19g00130 Blo-Chr19:3745824 Blo03g00788 Blo-Chr3:32848880 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13624 PF02362 B3 3.70E-29 CL0405 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo19g00130 - - pop:18103453 351.673