Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo19g00147 ATGTTTTCATGCGTAGCATGCACGAAGCGACAGGGACAGACAGAGGGAGAAGATGGAAGAGTGGGAAGCAGCAGCAGCAGCACACCAAACACAAAAGAAGCCGTCAAAAGCCTGACGGCGCAGATCAAGGATATGGCGATAAAATTCTCCGGTGCCAATAGGCCACGCCAGCCATACGCAGGCTCGGGATTATACAAGAAAGGTCACAGACCTTACTCGGGCCTTGCCGTGGCCGACTCAAACAAAATTCCATTTCCCTACAATGGTGGTGGGAGCTCGACATCAACACCGACGTGGAATTTTACAACATCAAATGCGAAAACTTCTCGGGTTTTGAGCACTCAGTCCGACGGAAATGTAGACTCTATCTCAACTCGATCGTGTAATGTGGTGTTGGAAGACGAGGACGAGCCGAAGGAGTGGATGGCGCAGGTCGAGCCTGGCGTTCATATTACTTTTATGTCACTCTCTAATGGTGGAAATGATCTAAGACGGATTCGATTCAGCCGGGAAATGTTCAACAAATGGCAAGCTCAGCAATGGTGGGGCGAAAACTACGACCGGATCATGGAGCTTTACAACGTCCAGAGGTTCAATCGGCAGGCTCTTCACACTCCGCCGAGGTCGGAGGACGCGATGGGATCGGGCATGGGAAATGGTCCAAGGGGCGAGCCACCATCTCTCGACGAATCACGAATGACCACCTCATCACAGGACGACGCATCCGTCTCTGTAAGCAATGCAAGCGAAATGGAGTCCGAATGGGTCGAGGAGGATGAACCCGGTGTGTATATAACTGTCAGACAGCTAGCGGACGGGGGCAGGGAGCTCCGTCGGGTCAGATTTAGCCGGGAGAAGTTTGGAGAGGTAAGAGCGAAGCAGTGGTGGGAAGAGAATAGAGAGAGAGTAGAGGCTCAGTACCTATGA 927 52.21 MFSCVACTKRQGQTEGEDGRVGSSSSSTPNTKEAVKSLTAQIKDMAIKFSGANRPRQPYAGSGLYKKGHRPYSGLAVADSNKIPFPYNGGGSSTSTPTWNFTTSNAKTSRVLSTQSDGNVDSISTRSCNVVLEDEDEPKEWMAQVEPGVHITFMSLSNGGNDLRRIRFSREMFNKWQAQQWWGENYDRIMELYNVQRFNRQALHTPPRSEDAMGSGMGNGPRGEPPSLDESRMTTSSQDDASVSVSNASEMESEWVEEDEPGVYITVRQLADGGRELRRVRFSREKFGEVRAKQWWEENRERVEAQYL 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 5144319 5147211 + BLOR09490 Blo19g00147 74288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo19g00147 308 ProSiteProfiles BRX domain profile. 139 194 IPR013591 -
Blo19g00147 308 ProSiteProfiles BRX domain profile. 253 308 IPR013591 -
Blo19g00147 308 MobiDBLite consensus disorder prediction 229 251 - -
Blo19g00147 308 MobiDBLite consensus disorder prediction 1 33 - -
Blo19g00147 308 MobiDBLite consensus disorder prediction 17 33 - -
Blo19g00147 308 MobiDBLite consensus disorder prediction 204 257 - -
Blo19g00147 308 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 215 - -
Blo19g00147 308 Pfam Transcription factor regulating root and shoot growth via Pin3 252 307 IPR013591 -
Blo19g00147 308 Pfam Transcription factor regulating root and shoot growth via Pin3 139 193 IPR013591 -
Blo19g00147 308 PANTHER PROTEIN BREVIS RADIX-LIKE 1 225 308 - -
Blo19g00147 308 PANTHER PROTEIN BREVIS RADIX-LIKE 1 225 308 IPR044532 -
Blo19g00147 308 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 215 IPR044532 -
Blo19g00147 308 Pfam Transcription factor BRX N-terminal domain 25 52 IPR027988 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00049 Blo-Chr5:411375 Blo19g00147 Blo-Chr19:5144319 5.01E-12 dispersed
Blo06g00745 Blo-Chr6:30650359 Blo19g00147 Blo-Chr19:5144319 4.06E-88 dispersed
Blo16g00974 Blo-Chr16:37987884 Blo19g00147 Blo-Chr19:5144319 1.20E-10 dispersed
Blo19g00147 Blo-Chr19:5144319 Blo03g00967 Blo-Chr3:35752574 6.28E-18 dispersed
Blo03g00092 Blo-Chr3:3083496 Blo19g00147 Blo-Chr19:5144319 8.59E-11 transposed
Blo19g00147 Blo-Chr19:5144319 Blo03g00811 Blo-Chr3:33497112 1.58E-151 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo19g00147 - - pvy:116141091 402.519