Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo19g00153 ATGTCCCTCCTAAGCCGTTTCTTTTATAAGAGACCCCCAGATGGCTTGCTTGAATTTTTTGAGCGAGTATACATTTTCGATTCGTGTTTCTCCACTGAAGTCTTGCCTGATGACATGTATCAAATATATCTCCATGAAGTTATAAATGAGCTACATGAAGAATTTTCTGACTCATCCTTCCTTGCATTTAATTTTCGTGAGGGCGAGAAAAAAAGTCAATTTGCCAAAATTCTGTGTGAATATGATGTTACCGTTCTGGATTATCCTCGGCAATACGAGGGTTGTCCTCTACTCCCACTATCTTTAATACAACATTTTCTCCGTGTTTGTGAGAGTTGGCTCTTGCTTGGAAACCAACAAAACATTGTTCTTCTTCATTGCGAGAGGGGTGGTTGGCCACTCTTGGCTTTCCTTTTGGCCAGCCTTTTGATTTTCAGAAAATTGCATAGTGGTGAGCGGAAGACTCTTGATATTGTGCACAGAGAAGCACCTAAAGGATTTTTACAGCTCTTGTCACCTCTAAATCCATTTCCATCTCAGTTGCGATACCTACAATATGTTGCAAGAAGAAACATATCTTTGGAGCGGCCGTCTTCAGAACGAGCACTTTCTTTAGATTGCGTAATACTTCGTGCAATACCAAGCTTTGATTCTCAGAATGGCTGCCGACCTTTTATTCGAATTTTTGGTAGGAATAATCTTAGCAAGGGTGGTCTTTCCACCCAAATGCTTTTTTCCATGCCCAAGAAGAAAAAAACTCTAAGATACTACTGTCAGGCAGACTCAGGCGTAATCAAAATAGATGTCCAGTGTCTGGTTCAAGGAGATGTGGTCTTGGAATGCGTGCATTTAGAATTGGAACCTGAAAGGGAAGTCATGATGTTTCGCATAATGTTTAACACAACATTTATTCGATCAAACATACTAATGCTGAATTGTGAGAACTTGGATATTCTTTGGGGTTCTAAGGAGCGATATCCAAAAGGATTTCGAGCTGAGGTTCTATTTGGAGAGGTTGAAAGCATCTCCCCTGCTAGAGCTCCCACTACAATTTTAAATGGTGAGGAGAAAGGTGGTCTACCAATCGAAGCTTTTTCCAGGGTTCAAGAACTTTTCAGTAATGCTGAGTGGGTGGATAATGGTGATGATGCGACATTGTGGGTACTCAAACAACTATCTGCCCTTGGAGATGTGAAAGAACTGTCAAGATTTCAAAGCAAAACAAGTTCACATTCATCACCTGTTGACTCAGAGGAAGAAAACTATTCGTCAAGTGCAAATGAGAGCTCAGAGGAAGTATTTGATACTATTCTCAATCCCTTACAGGATTCAAAATTAATAGTTTCAGATACAATAGAAACATCCTCGTTATCTTCTCAAAATTGTAGTCCTTATCAAGTGAAACTTGATTTGGAGCATGTTGATGAACAATCATTATCCACAGGTGAAGGATTGCCTCCTAGTTTATCTTCTCCATCACTATCTCCACTACCACCTACCATTTCTAGAGTAGTACTACCACCACCTCCTTTACCTCTTAACTTATCAAGTTCAATTTCTTCAACCCCTCTTGTTGCTACAGAATTACCTACTCCTATTGGGACTCCTATTTTTTCCAAAAATCTATTCTTATCCAAAGAACCTCCAAATTTGCAAGGTGATGCTACCCCAACTTTTCCCTTACCAATAGAACAACCTCTAAGATCTCCTCCTCCTCCCCCTCCCCCTCCCCCACCCCCACCAACTTTAGCTTATCCACAACCAAATACTCTAGACTATCGTCCTCCTCCACCTCCACCTCCACCTCCACCGCCACCGCCAACACCAAAAAACTTTCCAAATAGTGGTGTTGGGCCAACTCTCCCTTGTTCACCTCCAAAAGGTCCTAGTCCTCCTCCTCCCCCTCCCCCTCCACTGCCCAATGGAGCCAATAAACTTGCTCCATTTCAAAAGCCTCCTATTGCTCCTCCTCCTCCTCCTCCACCACCATTGTTGAGCACTATTGCTAAACCAATTGCACCTCCAAAGCCTCCTACTCCTCCTCCTCCACCATTGTTGAATGTTATTGCTAAACCAATTGCACCTACGGCCGGCCCGCCTCCTCCCCTGATTTCAGGTAAGCTACCACCACCTCCACCGCCATTACCACCAAAGTCTCTTGGTGCCCCCCTTCCCCAACCATTGCCAAAAGGTGGTGCTACACCCACTCCACCTCCTCCACCGCCAAAGCCATCTACCACTCCTCCATTATTAAGCAATGGTGCTCTGCCTCCTCCTCTTGTAGAGAAGGGCATGAGTGTGCGTCCACCTCCCCCTCCATCTGTTGGAAGAGGACGGATTTCTTCAGGACCAAACAGCCAAGGAAAAGGTCGAGTTATTAGTGCCACCATTAATGCTCCGAAGAGAACTTCTTTAAAGCCATTGCACTGGGTGAAAGTTACCAGGGCAATGAATGGGAGCTTATGGGCTGATTCACAAAAGCAGGAAAGTCACTTGAGGGCTCCCGAAATTGACATAACAGAACTTGAAAGTCTCTTCTCCGCAACCTCTGTATCAGATGGAAATGCTGCTAAAAGTGGAGGTCGTCGTGGTTCTAACATAAACAAACCTGAGAAAGTACAACTGGTTGACTTAAGAAGAGCATATAATTGTGAAATAATGCTGTCAAAAATAAAAATACCTTTGTCAGATATGATTAATTCTGTTCTTGCTTTGGATTCTTCTGCACTTGACATTGACCAGGTCGAGAATCTCATCAAATTTTGTCCTACAAGAGAAGAGATGGAAACACTACAGAATTATGCAGGTGATAAGGAGATGCTCGGAAAATGTGAACAGTTTTTCATGGAGCTGATTAAGGTTCCTCGAGTTGAGTCCAAGTTACGAGTATTTGCTTTCAAAATCAATTTTTCTAGTCAGGTGACGGATTTAAGACATAATTTAAACACAATTAATGATGCTGCTAGACAGGTAAAAGACTCTTCGAAGTTGCGGCAGATTATGCAAACAATTCTAACCCTTGGAAATGCCTTGAATCAGGGAACTGCGAGAGGCTCTGCCATAGGATTCAAATTGGACAGCCTTCTTAAATTGTCTGATACTCGAGCAAGAAACAACAAAATGACATTGATGCATTATTTGTGCAAGAGCTCCTCCGATTCTCAACTAGAAATGATGAGCAATGTCATCCGAGGGATGGGAGCCAATATAGAGAAGATTATGGGACATATTTCTTACCAGCTATCTGGCTTGCCTAGAATCGAGGAGAAGTTCAATCTCTTGCTGAAACTCTTGGCAGAGTTGAGGTTGCTAAGGGAAGAGTACCCATTCGAAGCACTGTCCGTCAAACTCTCATCTGGTGACAATGGAAAGGGAATACGAGACCTATGTCAAGGGAAAAAACAAAGGGAGATTTGTCAAAATGTTGAAAGACATGAGCAATTTTTTGGAGGATTGACACAGAAGCATTGGGTTCTGATAACAAAGATGGTCCAACCCTGA 3501 42.82 MSLLSRFFYKRPPDGLLEFFERVYIFDSCFSTEVLPDDMYQIYLHEVINELHEEFSDSSFLAFNFREGEKKSQFAKILCEYDVTVLDYPRQYEGCPLLPLSLIQHFLRVCESWLLLGNQQNIVLLHCERGGWPLLAFLLASLLIFRKLHSGERKTLDIVHREAPKGFLQLLSPLNPFPSQLRYLQYVARRNISLERPSSERALSLDCVILRAIPSFDSQNGCRPFIRIFGRNNLSKGGLSTQMLFSMPKKKKTLRYYCQADSGVIKIDVQCLVQGDVVLECVHLELEPEREVMMFRIMFNTTFIRSNILMLNCENLDILWGSKERYPKGFRAEVLFGEVESISPARAPTTILNGEEKGGLPIEAFSRVQELFSNAEWVDNGDDATLWVLKQLSALGDVKELSRFQSKTSSHSSPVDSEEENYSSSANESSEEVFDTILNPLQDSKLIVSDTIETSSLSSQNCSPYQVKLDLEHVDEQSLSTGEGLPPSLSSPSLSPLPPTISRVVLPPPPLPLNLSSSISSTPLVATELPTPIGTPIFSKNLFLSKEPPNLQGDATPTFPLPIEQPLRSPPPPPPPPPPPPTLAYPQPNTLDYRPPPPPPPPPPPPPTPKNFPNSGVGPTLPCSPPKGPSPPPPPPPPLPNGANKLAPFQKPPIAPPPPPPPPLLSTIAKPIAPPKPPTPPPPPLLNVIAKPIAPTAGPPPPLISGKLPPPPPPLPPKSLGAPLPQPLPKGGATPTPPPPPPKPSTTPPLLSNGALPPPLVEKGMSVRPPPPPSVGRGRISSGPNSQGKGRVISATINAPKRTSLKPLHWVKVTRAMNGSLWADSQKQESHLRAPEIDITELESLFSATSVSDGNAAKSGGRRGSNINKPEKVQLVDLRRAYNCEIMLSKIKIPLSDMINSVLALDSSALDIDQVENLIKFCPTREEMETLQNYAGDKEMLGKCEQFFMELIKVPRVESKLRVFAFKINFSSQVTDLRHNLNTINDAARQVKDSSKLRQIMQTILTLGNALNQGTARGSAIGFKLDSLLKLSDTRARNNKMTLMHYLCKSSSDSQLEMMSNVIRGMGANIEKIMGHISYQLSGLPRIEEKFNLLLKLLAELRLLREEYPFEALSVKLSSGDNGKGIRDLCQGKKQREICQNVERHEQFFGGLTQKHWVLITKMVQP 1166
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 5936315 5952717 + BLOR09496 Blo19g00153 74294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo19g00153 1166 Pfam C2 domain of PTEN tumour-suppressor protein 200 337 IPR014020 -
Blo19g00153 1166 Gene3D Formin, FH2 domain 793 1123 IPR042201 -
Blo19g00153 1166 SMART PTEN_C2_2 198 338 IPR014020 -
Blo19g00153 1166 MobiDBLite consensus disorder prediction 563 643 - -
Blo19g00153 1166 ProSiteProfiles Formin homology-2 (FH2) domain profile. 795 1166 IPR015425 -
Blo19g00153 1166 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 202 339 IPR035892 -
Blo19g00153 1166 Coils Coil 1087 1107 - -
Blo19g00153 1166 MobiDBLite consensus disorder prediction 545 791 - -
Blo19g00153 1166 MobiDBLite consensus disorder prediction 476 496 - -
Blo19g00153 1166 SUPERFAMILY Formin homology 2 domain (FH2 domain) 737 1095 - -
Blo19g00153 1166 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 68 187 IPR029021 -
Blo19g00153 1166 MobiDBLite consensus disorder prediction 650 755 - -
Blo19g00153 1166 Gene3D Protein tyrosine phosphatase superfamily 16 192 IPR029021 -
Blo19g00153 1166 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Blo19g00153 1166 MobiDBLite consensus disorder prediction 763 777 - -
Blo19g00153 1166 PANTHER FORMIN-J 700 1057 - -
Blo19g00153 1166 PANTHER FORMIN-J 1 701 - -
Blo19g00153 1166 Gene3D - 197 342 - -
Blo19g00153 1166 SMART it6_source 794 1164 IPR015425 -
Blo19g00153 1166 Pfam Formin Homology 2 Domain 800 1072 IPR015425 -
Blo19g00153 1166 MobiDBLite consensus disorder prediction 481 496 - -
Blo19g00153 1166 MobiDBLite consensus disorder prediction 406 431 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo19g00153 Blo-Chr19:5936315 Blo04g00781 Blo-Chr4:7742880 3.51E-103 dispersed
Blo19g00153 Blo-Chr19:5936315 Blo12g01054 Blo-Chr12:28328199 5.64E-136 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo19g00153 - - pop:7491911 1150.96