Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo19g00177 ATGGCTGGTTTGGATTTGGGAAATCGCTATGTTCATCCGCTACACTTACCAGACTTACATCTCCAAAGATTTCCTCAATCTCACCCGCCATCAAATTCTGAGGAAGATCTCAATCGGGGCACTCATTTTTCAGGTGAAGATGGATCTCACCAATCCTTAGACGGTGCCGGAGCTAACGCCGGAGATGTAATTGGTCGCAGACCTCGTGGGCGACCACCCGGCTCCAAAAACAAGCCTAAACCCCCGGTTATAATTACACGGGAGAGTGCCAACACTCTCCGAGCTCATATTCTAGAGGTTGGCAATGGCACTGATGTGTTCGACTGCGTCGCTACCTACGCCCGCCGTAGGCAGCGGGGGATCTGCATCTTGAGCGGGAGTGGGATGGTAACAAACGTCAGCCTGAGACAACCGACGGCTGCTGGTGCCGTCGTAACCCTACATGGGACGTTTGAGATACTTTCGCTTTCAGGTTCCTTTTTGCCGCCGCCAGCTCCTCCTGGAGCCACGAGTCTGACTATATTTTTGGCTGGCGGTCAAGGGCAGGTGGTTGGAGGAAGTGTCGTGGGGGGCCTGATTGCGGCTGGACCAGTAATCCTCATCGCTGCATCGTTTACTAATGTGGCCTACGAGAGACTGCCGTTGGATGAGGAGGAGAATCTTCCTGTGCAGGAGTCCGATTCTCCGGTAGCCGTAGCTGGAAGTGGTATTGACGTAGGGAATAACCCATTTCCGGATCCTTCTTCTGGGCCTCCTTTCCTCAATCTGCCACTTAATTTGCCTAACGTTCAGCTTCCCGGCGACGGGTGGGCAACTAATTCAGCAGCTCGTCCATTTTGA 840 53.33 MAGLDLGNRYVHPLHLPDLHLQRFPQSHPPSNSEEDLNRGTHFSGEDGSHQSLDGAGANAGDVIGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVGNGTDVFDCVATYARRRQRGICILSGSGMVTNVSLRQPTAAGAVVTLHGTFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGSVVGGLIAAGPVILIAASFTNVAYERLPLDEEENLPVQESDSPVAVAGSGIDVGNNPFPDPSSGPPFLNLPLNLPNVQLPGDGWATNSAARPF 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7583163 7584002 + BLOR09520 Blo19g00177 74318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo19g00177 279 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 1 278 - -
Blo19g00177 279 MobiDBLite consensus disorder prediction 25 48 - -
Blo19g00177 279 SUPERFAMILY AF0104/ALDC/Ptd012-like 90 222 - -
Blo19g00177 279 Gene3D - 93 227 - -
Blo19g00177 279 MobiDBLite consensus disorder prediction 21 84 - -
Blo19g00177 279 Pfam Plants and Prokaryotes Conserved (PCC) domain 94 207 IPR005175 -
Blo19g00177 279 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 278 IPR014476 GO:0003680
Blo19g00177 279 ProSiteProfiles PPC domain profile profile. 90 227 IPR005175 -
Blo19g00177 279 CDD DUF296 94 177 IPR005175 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g00836 Blo19g00177 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo16g00638 Blo-Chr16:25541665 Blo19g00177 Blo-Chr19:7583163 1.06E-97 dispersed
Blo19g00177 Blo-Chr19:7583163 Blo03g00383 Blo-Chr3:9086916 1.79E-80 dispersed
Blo19g00177 Blo-Chr19:7583163 Blo03g00836 Blo-Chr3:34084725 1.86E-150 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo19g00177 - - nnu:104610369 352.058