Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo19g00178 ATGGATCTACGGGAAGTTCAGCCACCGCCACCTTCTGCAGCATCAAATATGATGGTGGGAGTTGGACCTACCCATTACCCGACTTCCATGCCTAACTCGAACAATGCTATGATCGGCCCCAATTCTGCAGCAGCTCATATGATGTCGCCGACGTCCCGATTCCCGTTCAACACTGTGGTCACTCCCGTGTCGAAGCCTTTAGACTCGCAAAATTCTAATGTTTATGATGGATCGTCCACCGGATTGCGTACTGGTGGGTTTAACATTGAGACGGAGAAGAAGAAGAGAGGACGACCAAGGAAGTACTCGCCGGACGGTAACATTGCTTTGGGATTAGCGCCTACTACAGTGGGTCAGACTCAGGGTAATTCGAGTGGCACTCCATTAACGGAGCCACCTGCAAAAAAGAGCAGAGGAAGACCGCCCGGCTCCGGAAAGAAGCAAATGGACGCTTTGGGGACTGGTGGTGTTGGTTTTACCCCCCATGTTATCCTGGTGAATCCTGGAGAGGATATAGCATCCAAAATCATGGCCTTTTCAGAGCAAGGGCCAAGAACTGTTTGTGTTCTCTCTGCGTATGGTGCAGTCTGCAATGTTATGCTTCGTCAACCAGCTTCTGGTGGTGGCACTATGAGCTATGAGTTATATATATGCATGCCTATAGGGAAATATGAACTCATTTCTCTATCGGGTTCCTACTTGTTTGCTGAAAATCATGGTAGTCAAAGTCGATCTGGTGGCTTGAGTGTGATTATGGCCGGAGCAGATGGGCGAGTTCTTGGTGGTGGAGTTACAGGAATATTATTGGCTGCAACCCAAGTTCAGGTTATTGTGGGGAGCTTTATTGTGGATGAGAAAAAAGCCAATGCAAACATTCTAAAATCTTGCTCTTCAACTGCACCACAGCAAATGTTAAACTTTGGTGCCCAAGGGACGGACGCCAGCCCTTCGTCTCAAATGGCCTCCAGTGATTCATCTGATGAAAATGCCAGCAGCCCTCTTGCCCGGCCCCCAGGAATTTACAACAACACAAGCCAGCCAATTCAAAATAACATTCAGATGTATCGGCTATGGGGCGACCAAACGCAACATTGA 1095 48.49 MDLREVQPPPPSAASNMMVGVGPTHYPTSMPNSNNAMIGPNSAAAHMMSPTSRFPFNTVVTPVSKPLDSQNSNVYDGSSTGLRTGGFNIETEKKKRGRPRKYSPDGNIALGLAPTTVGQTQGNSSGTPLTEPPAKKSRGRPPGSGKKQMDALGTGGVGFTPHVILVNPGEDIASKIMAFSEQGPRTVCVLSAYGAVCNVMLRQPASGGGTMSYELYICMPIGKYELISLSGSYLFAENHGSQSRSGGLSVIMAGADGRVLGGGVTGILLAATQVQVIVGSFIVDEKKANANILKSCSSTAPQQMLNFGAQGTDASPSSQMASSDSSDENASSPLARPPGIYNNTSQPIQNNIQMYRLWGDQTQH 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7602466 7606441 - BLOR09521 Blo19g00178 74319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo19g00178 364 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 13-LIKE ISOFORM X1 76 349 - -
Blo19g00178 364 CDD DUF296 160 281 IPR005175 -
Blo19g00178 364 Pfam Plants and Prokaryotes Conserved (PCC) domain 161 281 IPR005175 -
Blo19g00178 364 SUPERFAMILY AF0104/ALDC/Ptd012-like 159 282 - -
Blo19g00178 364 MobiDBLite consensus disorder prediction 70 152 - -
Blo19g00178 364 Gene3D - 161 295 - -
Blo19g00178 364 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 76 349 IPR039605 GO:0003680
Blo19g00178 364 MobiDBLite consensus disorder prediction 307 346 - -
Blo19g00178 364 MobiDBLite consensus disorder prediction 88 102 - -
Blo19g00178 364 MobiDBLite consensus disorder prediction 70 86 - -
Blo19g00178 364 ProSiteProfiles PPC domain profile profile. 155 302 IPR005175 -
Blo19g00178 364 SMART AT_hook_2 93 105 IPR017956 GO:0003677
Blo19g00178 364 SMART AT_hook_2 135 147 IPR017956 GO:0003677
Blo19g00178 364 MobiDBLite consensus disorder prediction 113 131 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g00838 Blo19g00178 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo17g00908 Blo-Chr17:29889996 Blo19g00178 Blo-Chr19:7602466 2.53E-66 dispersed
Blo19g00178 Blo-Chr19:7602466 Blo06g01099 Blo-Chr6:34289484 4.70E-50 dispersed
Blo19g00178 Blo-Chr19:7602466 Blo03g00838 Blo-Chr3:34108482 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo19g00178 - - zju:107430497 414.846