Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo19g00180 ATGCAGCTCGAGATCTCGTACGAAAGCTGCTCGGAGGTCGGTGGGAATCGGCAGATTGAGTCTTCAGCAAAGAAAGATGCTTTTGAAGGAGACGTTAATGTTATGAAGAATGTGTTCAGTCTCAAGAAAATGAAAAAAATATTGCCGGCTTCTAATCCAGATGAATTCGACTGTGTGGACATATACAAGCAACCTGCTTTCGATCATCCTATGCTCAAAAATCACAAAATTCAATTAGAACAAGGTTATCTTGAAGCTTCCGAGCAATTTCCTTCAAAAAGCAGTTGCCCACCTGGAAAGGTTCCCATTGCAAAGGCCGCCACCAGCCATCCGGGAAATCTTCATGAACTAAAAAGTGTTTATTACGGCCAACAATTTGCTGCAGTGGAATCGGGGCTAGGGTACATGCTTCATGGAGCAAGATCATTGATTGAGCTTTATAATCCACATCCTCTTCAGAATTTCCAGTTTAGCATGGCTAACATTTGGGTTCTAGGTGGTCCTAAGTCTGAGCTTAATAGCCTTCAGGCTGGTTGGGGAGTGCATCCGTTTCTCTACAAAGACAATAATACACATTTGACGACATATTGGACGGCAGATAACTATGTTAAAACAGGATGTTATAATACACGATGTCCGGGTTTTGTTCAAACACATCGCTCCATTTATCCTGGTCAAAGTTTTGCAAAAGATCATGTAGGTGGAAAACAACACTATGTTGTGGATGTGGCTTTGTTTCAGGACCAAGAAACTGGAAATTGGTGGTTAATTTTGAATAAATACACTAAAATTGGTTATTGGCCGAAGGAAATTTTCACTCATTTAGTGGAACAAGCAACTCATCTACGATATGGAGGATGGACGAATAAGTTTCCACTGCTTCCGAGTCCTCCAATGGGGAATGGTAAATTTCCAACTAAAGACATCAGGCAATCGAGTTTCTTCGCCAGAGTTAGAGTTTTCAATTCTTCGTACATCATAACCAAGTCGTCGACTTTAACGATGAGTACAAGGGTTGATGCTCCAAGCTGTTACAATGCCATTTATATGGCCAACCAAGGTGAACCCTCTGGAGATTTGTTTACTTATGGAGGGCCTGGGGGGACAAACTGTGGGGTTTGA 1122 41.89 MQLEISYESCSEVGGNRQIESSAKKDAFEGDVNVMKNVFSLKKMKKILPASNPDEFDCVDIYKQPAFDHPMLKNHKIQLEQGYLEASEQFPSKSSCPPGKVPIAKAATSHPGNLHELKSVYYGQQFAAVESGLGYMLHGARSLIELYNPHPLQNFQFSMANIWVLGGPKSELNSLQAGWGVHPFLYKDNNTHLTTYWTADNYVKTGCYNTRCPGFVQTHRSIYPGQSFAKDHVGGKQHYVVDVALFQDQETGNWWLILNKYTKIGYWPKEIFTHLVEQATHLRYGGWTNKFPLLPSPPMGNGKFPTKDIRQSSFFARVRVFNSSYIITKSSTLTMSTRVDAPSCYNAIYMANQGEPSGDLFTYGGPGGTNCGV 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7721288 7726473 - BLOR09523 Blo19g00180 74321

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo19g00180 373 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 44 369 - -
Blo19g00180 373 Pfam Neprosin 156 366 IPR004314 -
Blo19g00180 373 Gene3D - 150 283 - -
Blo19g00180 373 Pfam Neprosin activation peptide 54 105 IPR025521 -
Blo19g00180 373 PANTHER CARBOXYL-TERMINAL PEPTIDASE 44 369 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo19g00180 - - - zju:112493312 283.493
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00295 Blo-Chr12:17412390 Blo19g00180 Blo-Chr19:7721288 9.97E-59 dispersed
Blo18g00650 Blo-Chr18:11911834 Blo19g00180 Blo-Chr19:7721288 4.38E-08 dispersed
Blo19g00180 Blo-Chr19:7721288 Blo17g00550 Blo-Chr17:9781917 3.35E-56 dispersed
Blo19g00179 Blo-Chr19:7638149 Blo19g00180 Blo-Chr19:7721288 1.49E-160 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g449 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo19g00180 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0016684 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 7