Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo19g00207 ATGTTGGTTGGGTTTTCTTCCCCATTGTGTTCTGATGGTCGGGCATTGGCTAGGGTGCTCAGAGCTCAGCGTTCGACGAGCGGCATCACGCCGGCAGTGGAGAACTCGCGAAGGGCAGGGAGTTCGCCGACGGGTGATTCTCTCCTGGAAGCCGAGTGTGCCTTCTCTGGAGACTTTTGTAGGAGGTTGAGTGGTGAAGCTCTGGATGCTCGGGTCTGCCTCGTCTTGATGAAAGAAGAAAGTGTGTTGTTGAGATCAGGAAAAGAGGAAATGGAGAGTGGGTCTGGAAGTGAACAGGTTGAAGAGAGATCGGGAAATGAGCAGGAAAGTGGGCAGCAACCTCCTAAGAAAAAACGCTACCATCGCCACACAGCCCGCCAGATCCAAGAAATGGAATCTTTATTTAAGGAATGTCCACACCCAGATGACAAGCAGAGGCTAAAACTAAGCCATGATCTTGGCCTAAAACCTCGTCAAGTCAAGTTCTGGTTCCAAAACCGAAGAACCCAGATGAAGGCACAGCAAGATAGATCTGACAATGTAATTCTTAGAGCCGAAAATGACACATTAAAGAACGAGAACTATAGGCTTCAATCTGCTCTCCGTAATATCATCTGCCCTAATTGTGGGGGTCAAGGTCTGTTGGGGGAGCCTAGCTTGGATGAACAGAAACTTCGCCATGAAAATGCTCGTCTTAGAGAAGAGTTAGAACGATTTTGCTGTTTAACTTCACGATACACGGGACAAGCTCTTCCGGCCATGGCACCGGCTGCACAACTTGTATCGCCATCCTTGGATTTAGACATGAGTATATATTCGAGGCAATTTCAAGATCAGCCAATGGTTTCTTCAGCTGATTTAATTCAAGTGCCAATGCTTCGTGCTGAAACCATCCAATTTCCGGAGGGAGGTCCTCTTTTAGAAGAGGAGAAGTCAATGGCTATGGAGCTTGCTTTGTCCTCCATGAACGACCTGGTGAAAATGTGCCAAACAGCTAAACCCCTTTGGATCCGAGACAGTCAAAGTGGGAGAGAAGTTTTGAATTTTGAAGAACATTCGAGAATGTTTCCATGGTCTTTGAATCTTAAACACCATTCGGATGAGTTTAGAACAGAAGCCACACGTGATAGTGCTGTTGTTATAATGAACAGCATCACTCTAGTTGATGCATTTGTTGATGCTAATAAGTGGATGGAGCTGTTTTCATCGATTGTTGCAAGAGCCAAAACTGTTCAAGTAATATCGTCGAGTTCTTCCGGTCATGCAAGTGGCTCACTTCAACTGAAGATGCTTGAAAGGGTGAATCCGGTGATTTATGCAGAATTTCAAATTCTTTCGCCTCTTGTGCCCACTCGAGAAGCAAATTTTCTTCGTTATTGTCATCAAAATGTGGAGGAGGGAAGTTGGGTGATCGTTGATTTTCCGGTCGATAGCTTTCATGACAATGTTCAGACTTCTCTTCCTAGGTATAGGAGACGACCCTCTGGCTGTATCATCCAAGATATGCCTAATGGCTACTCTAGGGTGACATGGATGGAACATGCAGAAATAGAGGAGAAGCCAATTCATCAGATATTCAATCAGTTTGTAAGCAGTGGGATGGGCTTTGGAGCACAACGCTGGTTAGCCGTCCTACAGAGACAATGTGAGAGGCTTGCTAGTCTCATGGCTAGAAATATTTCAGATCTTGGAGTGATACCATCTCCAGAGGCTAGGAAGAATTTGATGAAGCTGGCTCAGAGAATGATTAGAACATTCAGTGTGAACATCAGCAGCTCCAATGGCCAATCATGGACTGCCCTATCCGACTCCCCTGATGACACAGTTCGGATCACCACCCGCAAAAGCATCGAACCAGGCCAGCCTACTGGTCTTATCCTCAGCGCCGTCTCCACCACTTGGCTCCCGTTCCCCCATTACAGGGTTTTCGACCTCCTGAAAGACGAACAGCGTCGTTCTCAGTTGGACGTTATGTCTAATGGGAATCCTTTGCATGAGGTTGCTCACATTGCCAATGGCTCCCATCCTGGAAACTCCATCTCTCTTCTTCGCATCAATGTGGCGAGCAACTCATCGCAGCATGTGGAGCTGATGCTGCAAGAGAGCTGCACCGATCACTCGGGCAGCATCGTCGTCTACACCAACATTGACGTCGATTCCATTCAGCTGGCCATGAGCGGTGAAGATCCTTCCTGCATTCCCCTTCTTCCTCTCGGCTTTGTCATCGTCCCTGCCACCTCCGCAGCCGGAAACCCTACAGACCCACCTTCTGGAGATCCAGCCGGAGCATCCCCACCCTCCATCCCCTGCTGTCTACTGACTGTGGGGCTCCAGGTATTAGCCAGCACAATCCCCTCAGCCAAGCTCAGCCTCTCCAGCGTCACCGCCATTAACAACCACCTCTGCAATACGGTTCACCAAATCACCGCCGCTCTCACCTCCGCCCCCGACCGCTCTGACCAGCTTTCTGCGCCATCTAAGTGA 2484 48.71 MLVGFSSPLCSDGRALARVLRAQRSTSGITPAVENSRRAGSSPTGDSLLEAECAFSGDFCRRLSGEALDARVCLVLMKEESVLLRSGKEEMESGSGSEQVEERSGNEQESGQQPPKKKRYHRHTARQIQEMESLFKECPHPDDKQRLKLSHDLGLKPRQVKFWFQNRRTQMKAQQDRSDNVILRAENDTLKNENYRLQSALRNIICPNCGGQGLLGEPSLDEQKLRHENARLREELERFCCLTSRYTGQALPAMAPAAQLVSPSLDLDMSIYSRQFQDQPMVSSADLIQVPMLRAETIQFPEGGPLLEEEKSMAMELALSSMNDLVKMCQTAKPLWIRDSQSGREVLNFEEHSRMFPWSLNLKHHSDEFRTEATRDSAVVIMNSITLVDAFVDANKWMELFSSIVARAKTVQVISSSSSGHASGSLQLKMLERVNPVIYAEFQILSPLVPTREANFLRYCHQNVEEGSWVIVDFPVDSFHDNVQTSLPRYRRRPSGCIIQDMPNGYSRVTWMEHAEIEEKPIHQIFNQFVSSGMGFGAQRWLAVLQRQCERLASLMARNISDLGVIPSPEARKNLMKLAQRMIRTFSVNISSSNGQSWTALSDSPDDTVRITTRKSIEPGQPTGLILSAVSTTWLPFPHYRVFDLLKDEQRRSQLDVMSNGNPLHEVAHIANGSHPGNSISLLRINVASNSSQHVELMLQESCTDHSGSIVVYTNIDVDSIQLAMSGEDPSCIPLLPLGFVIVPATSAAGNPTDPPSGDPAGASPPSIPCCLLTVGLQVLASTIPSAKLSLSSVTAINNHLCNTVHQITAALTSAPDRSDQLSAPSK 827
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 10098204 10112261 + BLOR09550 Blo19g00207 74348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo19g00207 827 MobiDBLite consensus disorder prediction 86 123 - -
Blo19g00207 827 ProSitePatterns 'Homeobox' domain signature. 149 172 IPR017970 GO:0000981|GO:0006355
Blo19g00207 827 Gene3D - 101 185 - -
Blo19g00207 827 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 100 818 IPR042160 -
Blo19g00207 827 SUPERFAMILY Bet v1-like 308 553 - -
Blo19g00207 827 ProSiteProfiles START domain profile. 307 554 IPR002913 GO:0008289
Blo19g00207 827 SUPERFAMILY Homeodomain-like 103 175 IPR009057 -
Blo19g00207 827 SMART START_1 316 551 IPR002913 GO:0008289
Blo19g00207 827 SUPERFAMILY Bet v1-like 569 808 - -
Blo19g00207 827 CDD START_ArGLABRA2_like 311 550 - -
Blo19g00207 827 Pfam Homeodomain 117 172 IPR001356 GO:0003677
Blo19g00207 827 SMART HOX_1 115 178 IPR001356 GO:0003677
Blo19g00207 827 CDD homeodomain 117 175 IPR001356 GO:0003677
Blo19g00207 827 Pfam START domain 316 551 IPR002913 GO:0008289
Blo19g00207 827 ProSiteProfiles 'Homeobox' domain profile. 114 174 IPR001356 GO:0003677
Blo19g00207 827 Gene3D - 358 548 IPR023393 -
Blo19g00207 827 PANTHER - 100 818 - -
Blo19g00207 827 MobiDBLite consensus disorder prediction 86 105 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo19g00207 Blo-Chr19:10098204 Blo15g00501 Blo-Chr15:8462599 0 dispersed
Blo19g00207 Blo-Chr19:10098204 Blo15g00036 Blo-Chr15:291196 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13631 PF01852 START 2.60E-40 CL0209 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo19g00207 - - csv:101212772 1105.51