Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo19g00290 ATGTCTCTCCTCTTATTCTCGCCTGTAACGGCTAGGGAAGTGAAAGAAGTCAGCCAAAGAATTCAGACAGACAGTCTCCAAAAAACTTATTTTGTTCACGTGAAGAAACCTGCAGGAAGAGTTTTTGCTAGTTCAGATGATGTATATGCTTGGTACAAGTCGTTTTTACCTTCCCGGGCTGCAACCTCAAATAGCAGGCCTCAGTTGGTGTACTCGTACAAGAACGTATTTTCTGGATTTGCGGCAAAATTGACGGAAGATGAAGCTAAGGCTATGGCATCGAGAGACGGGTTTGTTTCCGCAAGGGAAGAGAAGAAACTTTCTTTACATACAACTCATACTCCCAACTTCTTGGGGTTAAGGAAGGGTAATGGACTTTGGGGAGCGTCGAATCTCGGAAAGGGTATGATCATCGGGCTTTTGGATACTGGAATATTCCCCAACCATCCCTCATTTTCTGACCATAATATGCCTCCTCCTCCGGCGAAATGGAAAGGCCAATGTGATTTTAATGGATCAGTTTGTAACAATAAGCTTATCGGAGCTAGAAGCTTCGTCAATGGAGTTGGCGGACAACCTTTCGATGAAGAAGGACATGGGACACACACTTCAAGCACCGCTGCCGGAAATGTCGTTAAAGGAGCTGAGGTACTCGGAAATGCCAATGGCACAGCCGTTGGTATGGCTCCTCTTGCACACTTGGCTATGTACAAGGTGTGCTCGGAAGACGCATGTTCGGAGAGTGATATATTGGCAGCAATGGACACAGCCATAGAGGACGGGGTTGATGTGCTTTCCCTCTCTCTCGGGGGAGGGTCAGTTCCGTTCTTCGCCGACTCGATTGCAGTCGGTGCTTTCGCGGCAATTCAGAAGGGAATTTTCGTGAGTTGCTCGGCAGGAAACGATGGTCCGTCTCACGGTACATTGGCTAACGAAGCTCCGTGGATTCTTACAGTCGGCGCGAGCACAATAGATAGAAGCATAAGAGCGACTGCGAAGCTCGGAAATGGAAACGAATATGACGGAGAATCAGTCTTTCAACCGAAGAATTTTGGGTCTGCCCTCTTACCTCTTGTCTATGCTGGTGCCGACGGAAATCAAACATCGGCATTTTGCTCCGCTGGGTCACTAAAAGACCTCGACGTAAAGGGAAAGGTCGTGTTATGCGACAGAGGAGGCGGAGTGGCGCGCATTGCCAAGGGGCAGGAAGTGAAAGACGCAGGCGGAGCCGCGATGATTCTGACTAATCAACAACCGGACGGGTTCAGCACCTTGGCTGATGCTCATGTTCTTCCTGCCACTCATGTCAGCTTCTCAGCTGGTTCGAGGATCAAAGCTTATATAAACTCGACTAACTCTCCAATGGCGACGCTCTTGTTTGAAGGGACTGTAATTGGAGGCGTGCTTGCTCCTTCCGTCACTTCATTTTCTTCGCGCGGTCCCAATGTCCAGAGCCCCGGAATTCTAAAACCGGACATTATCGGACCAGGTGTGAGCATTTTAGCGGCATGGCCATTTCCTTTGGACAACAACTCGAACAAAGAATCTACGTTCAACATAATCTCAGGAACTTCAATGTCTTGCCCTCACCTCAGCGGAATCGCAGCGTTGCTCAAAAGTTCTCACCCCGATTGGTCTCCCGCCGCCATTAAATCGGCGATTATGACCTCCTCCGACTCCCTGAACCGCCAAGGATATCCTATTTTAGACGAACAACTCCTTGCCGCCGACGTATTCGCTACAGGATCCGGCCATGTTAATCCGTCAAAAGCAGACGATCCGGGACTGATTTACGACCTCCAACCGGACGATTACATTCCGTATCTATGCGGATTAAATTATACAGACACTGAAATCGAATCGATTGTTCAGAAAAACGTGAGTTGCTCGGAGGTAGGGAGCGTACCAGAAGCACAGCTGAACTATCCCTCGTTTTCCGTCTTCTTGGGATCGGAATCTCAGTCGTTCACGAGGACAGTGACGAACGTAGGGTTAGCGAAGTCGAATTACAGATTAGTGATCTCGGCGCCTCCCGGAGCGGAGGTTGTAGTTGAGCCTTCCGAACTTTCATTCGTGGCGGTAAAACAGACGGCGACATTTAAAATCACTTTCAGTCTTGCAGGAAACGTAACCGCTCCGTTCGGTCAGGGATTTATAAACTGGGTATCTGATAAATATTCAGTTCGAACGCCATTAGTTGTCATTTTTGATTGA 2214 48.64 MSLLLFSPVTAREVKEVSQRIQTDSLQKTYFVHVKKPAGRVFASSDDVYAWYKSFLPSRAATSNSRPQLVYSYKNVFSGFAAKLTEDEAKAMASRDGFVSAREEKKLSLHTTHTPNFLGLRKGNGLWGASNLGKGMIIGLLDTGIFPNHPSFSDHNMPPPPAKWKGQCDFNGSVCNNKLIGARSFVNGVGGQPFDEEGHGTHTSSTAAGNVVKGAEVLGNANGTAVGMAPLAHLAMYKVCSEDACSESDILAAMDTAIEDGVDVLSLSLGGGSVPFFADSIAVGAFAAIQKGIFVSCSAGNDGPSHGTLANEAPWILTVGASTIDRSIRATAKLGNGNEYDGESVFQPKNFGSALLPLVYAGADGNQTSAFCSAGSLKDLDVKGKVVLCDRGGGVARIAKGQEVKDAGGAAMILTNQQPDGFSTLADAHVLPATHVSFSAGSRIKAYINSTNSPMATLLFEGTVIGGVLAPSVTSFSSRGPNVQSPGILKPDIIGPGVSILAAWPFPLDNNSNKESTFNIISGTSMSCPHLSGIAALLKSSHPDWSPAAIKSAIMTSSDSLNRQGYPILDEQLLAADVFATGSGHVNPSKADDPGLIYDLQPDDYIPYLCGLNYTDTEIESIVQKNVSCSEVGSVPEAQLNYPSFSVFLGSESQSFTRTVTNVGLAKSNYRLVISAPPGAEVVVEPSELSFVAVKQTATFKITFSLAGNVTAPFGQGFINWVSDKYSVRTPLVVIFD 737
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 18322437 18324650 - BLOR09633 Blo19g00290 74431

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo19g00290 737 CDD PA_subtilisin_like 331 458 - -
Blo19g00290 737 Gene3D - 609 736 - -
Blo19g00290 737 Pfam PA domain 357 444 IPR003137 -
Blo19g00290 737 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 138 149 IPR023827 -
Blo19g00290 737 CDD Peptidases_S8_3 109 559 IPR034197 -
Blo19g00290 737 Pfam Peptidase inhibitor I9 30 110 IPR010259 -
Blo19g00290 737 Gene3D - 325 466 - -
Blo19g00290 737 Pfam Fibronectin type-III domain 639 734 IPR041469 -
Blo19g00290 737 ProSiteProfiles Serine proteases, subtilase domain profile. 106 592 - -
Blo19g00290 737 SUPERFAMILY PA domain 370 453 IPR046450 -
Blo19g00290 737 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 735 IPR045051 -
Blo19g00290 737 SUPERFAMILY Subtilisin-like 109 596 IPR036852 GO:0004252|GO:0006508
Blo19g00290 737 Pfam Subtilase family 133 564 IPR000209 GO:0006508|GO:0008236
Blo19g00290 737 PRINTS Subtilisin serine protease family (S8) signature 195 208 IPR015500 -
Blo19g00290 737 PRINTS Subtilisin serine protease family (S8) signature 522 538 IPR015500 -
Blo19g00290 737 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Blo19g00290 737 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 25 735 - -
Blo19g00290 737 Gene3D Peptidase S8/S53 domain 135 605 IPR036852 GO:0004252|GO:0006508
Blo19g00290 737 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 13 110 IPR037045 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo19g00290 - - - vvi:100242816 992.26
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo08g00292 Blo-Chr8:4084948 Blo19g00290 Blo-Chr19:18322437 2.25E-09 dispersed
Blo19g00290 Blo-Chr19:18322437 Blo16g00601 Blo-Chr16:24478119 0 dispersed
Blo19g00290 Blo-Chr19:18322437 Blo04g01076 Blo-Chr4:15831328 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g452 . . . . . . . Bma14g00573 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo19g00290 . . Bpe08g01455 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002315 3 2 1 2 2 2 1 1 3 3 2 2 1 2 2 1 2 3 1 1 2 8 1 0 2 5 1 1 2 3 62
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo19g00290 Blo_Chr19 FPKM 61.530811 64.090988 27.522154 27.178541 13.968835 15.63323 14.282787 37.611801 35.945072 35.036213