Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo19g00297 ATGGACGGCCATTCTCTTCCATTCCCTTTTCACACCAGAGACTTTCACCAGGAGCAGCATCAATTTCAAACCTCGGAGGACGAACAAACTGGAAGCAGCGGACTGAACAACAGAACCCAGATCAAGCGAGATCGCAATGACAATATTGATGACTCTGGCGCTGGAGAAAGCAGCAAGGATGTCGGCACAGGTGGTGGAGAAGGCGAGATGTCCAGAAGGCCGCGAGGCCGACCCGCTGGGTCAAAAAACAAGCCAAAGCCTCCCATCATCATCACCCGCGACAGTGCCAACGCCCTTCGGACCCACGTCATCGAGGTCACTGATGGCAGTGACATCGTCGAGAGCATTGCCACCTTTGCCCGCCGCCGGCAGCGTGGTCTCTGCATCATGAGCGGCACCGGCACTGTCATGAACGTGTCAATAAGTCAACCATCATCTCCCAGTGCAATCGTCAATTTACACGGCCGATTTGAAATCCTTTCTCTTGCCGGATCTTTCCTCCCTCCTCCTGCACCGCCTGCCGCTACGAGCTTGACAATTTACTTAGCCGGAGGGCAAGGGCAGGTGGTCGGTGGTAGCGTCGTCGGAACCCTAATCGCCTCCGGTCCAGTTGTAATAATGGCGGCTTCGTTTAGCAACGCAGCATACGAGAGGCTTCCTCTTGACGAAGATGATCAGCCGTTGCCGATCCCAGGCGGTGGTTTAAGGTCGCCTGGTGAAGTACCTGACCAACAACAACAACAACAGCAGCAGCAACAACTTTTAGGAGATTCCAATGTCGCAAATTTATTTCATGGGTTGCCTCCTAATCTTCTCAACTCCATTCCGTTGCCTAACGAAGGGTATTGGGCAACTGGCCGACCACCTTACTGA 873 53.72 MDGHSLPFPFHTRDFHQEQHQFQTSEDEQTGSSGLNNRTQIKRDRNDNIDDSGAGESSKDVGTGGGEGEMSRRPRGRPAGSKNKPKPPIIITRDSANALRTHVIEVTDGSDIVESIATFARRRQRGLCIMSGTGTVMNVSISQPSSPSAIVNLHGRFEILSLAGSFLPPPAPPAATSLTIYLAGGQGQVVGGSVVGTLIASGPVVIMAASFSNAAYERLPLDEDDQPLPIPGGGLRSPGEVPDQQQQQQQQQQLLGDSNVANLFHGLPPNLLNSIPLPNEGYWATGRPPY 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 18628750 18629622 - BLOR09640 Blo19g00297 74438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo19g00297 290 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 3 290 - -
Blo19g00297 290 MobiDBLite consensus disorder prediction 222 253 - -
Blo19g00297 290 MobiDBLite consensus disorder prediction 7 23 - -
Blo19g00297 290 SUPERFAMILY AF0104/ALDC/Ptd012-like 96 231 - -
Blo19g00297 290 MobiDBLite consensus disorder prediction 40 54 - -
Blo19g00297 290 MobiDBLite consensus disorder prediction 24 39 - -
Blo19g00297 290 PIRSF ESCAROLA 10 290 IPR014476 GO:0003680
Blo19g00297 290 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 3 290 IPR014476 GO:0003680
Blo19g00297 290 Pfam Plants and Prokaryotes Conserved (PCC) domain 100 213 IPR005175 -
Blo19g00297 290 Gene3D - 99 227 - -
Blo19g00297 290 MobiDBLite consensus disorder prediction 1 91 - -
Blo19g00297 290 ProSiteProfiles PPC domain profile profile. 96 232 IPR005175 -
Blo19g00297 290 CDD DUF296 100 167 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00206 Blo-Chr3:4807881 Blo19g00297 Blo-Chr19:18628750 5.96E-117 dispersed
Blo12g00314 Blo-Chr12:18512274 Blo19g00297 Blo-Chr19:18628750 1.56E-69 dispersed
Blo19g00297 Blo-Chr19:18628750 Blo15g00064 Blo-Chr15:531149 1.39E-69 dispersed
Blo19g00297 Blo-Chr19:18628750 Blo03g00383 Blo-Chr3:9086916 3.17E-176 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo19g00297 - - jre:109020760 379.407