Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo19g00320 ATGACCTGCACTGCCTGTTCTACAGCAGTTGAGCAAAACTTACAATCAATCAATGGCGTTGAAAGAGCTGCAGTTGCATTGGCAATAGAGGAAGCTGAAATTCACTACAACTCAGAAATCGTAAAGCCTGAAACTCTTCTTCAGTCTATTCAAGATTCTGGATTTGCACCCACACTCCTCGCCATTGGAGAGCACTCGAGCAAAATAGAACTTAAAATTGAAGGTTTGAGAACAGATGATTCAATGGCGATCATTGAAAATTCTCTCAAATCAGTTGTTGGAATACAAGATACAGTTGCTGACCCTACGCTCGGGAAAATCTCTATTTCTTACAGACCAGACATGGTGGGACCGAGGACATTCATTGAGGTCATTGAATCGATCAAATCTGGAGCTTTCAAAGCAACCATTTTTCCTCAAGAAAGAAGAGATTCATACAGGGAGAAAGAAATCAAACAGTATTTTCGATCATTCTTATGGAGCTTTGCTTTTGCGATTCCTGTTTTTCTAACTTCCATGGTGTTCATGTACATTCCTACAATCGAACGAGCACTGGATACTAAAGTATGGAATATGATGACTATAGGAATGATTGTGAGGTGGGAACTAGCAACGCCAGTGCAGTTCTTCATTGGCCGTAGATTCTACGTCGGAGCCTATAAATCTCTCCGACATGGGTCGGCTAATATGGATGTTTTAGTTGCATTAGGAACAAATGCAGCCTATTTTTATTCAGTCTATATCATAATAAGATCAGTTTCTTCCCCACATTTTGAGGGCACAGATTTTTTTGAAACCAGCACAATGCTGATTTCATTTATTCTTCTGGGGAAATACTTGGAGGTTTTGGCGAAAGGGAAGACGTCGGAAGCCATAGGCAAGCTTATGAACTTAGCTCCAGAAACAGCGACTTTGTTGAGTCTGGATGAGGGGGAAAACGTGGTGAGTGAGAGAGAGATTGATAGCCGTCTGATTCAGAAGAATGATGTGATTAAGGTGCTTGCAGGTGAGAAAGTGGGGTCAGATGGATACGTTGTATGGGGAGAGAGCTGTGTGAACGAGAGTATGATAACAGGAGAAGCAAAGCCAGTGGGGAAGAAGAAAGGTGATGCAGTGATTGGAGGAACAGTCAATGAAAATGGAGTTCTCCATGTTAGGGCCACGAGAGTTGGATCAGATAGTGCTCTTTCTCAGATTGTTAGACTCGTTGAATCGGCCCAGATGGCTAAAGCTCCGGTTCAGAAATTCGCTGATACAATTTCCAAGTTCTTTGTACCTATTGTTATTGCGCTTTCACTTTTGACATGGGTAACCTGGTATTTAACTGGAAAGTTTAATCTTTATCCAAAACCATGGATACCATCTTCAATGGATAGCTTTGAGCTTGCTCTTCAATTTGGAATATCAGTGATGGTTATAGCCTGCCCCTGTGCATTAGGCCTTGCAACTCCTACGGCCGTCATGGTCGGCACGGGTGTCGGTGCCACTCAAGGAGTGCTCATCAAAGGAGGTCTAGCCTTAGAATCCACCCATAAGGTGAACTGCATAGTGTTCGACAAGACTGGAACTCTAACAGTGGGGAAGCCAATGGTTGTAAGAGAAATGCTCTTCAAAGATATGAAACTTGATCATCTACTTATTCTCGTTGGTGCAACTGAGGTGAATAGTGAGCACCCTGTGGGCAAAGCCATTGTTCATTATGCAAAGAACTGTAGAGATGGGGAAGAACATAGTTCTTCCTGGCCAGAAGCTAAGAACTTCATCTCCATTGCTGGCCAAGGAGTTAAAGCTACAGTAAAAAACAAGGAAGTTATTGTGGGTAACAAGAGCTTGATGATCAACCACAACATAGCAATTCCAATTGAAGCTCAAAATTTCCTAGCTGAAGCAGAAACTATGGCTCAAACTGGAGTTATCGTAGCCATTGATGGGGAGGTCGAAGGAGCTTTCGCCATTTCTGATACGCTAAAACCAGGTGCAAAAGAAGTCATTTCTATTCTAAACTCCATGAAAGTGAAAAGCATAATGGTGACCGGAGATAACTGGGGTACGGCGAATTCCATCGCCATGGAAGTCGGAATAGAAACAGTCATGGCTGAGGCTAAACCTGAGCAGAAAGCTGATAAAATTAAGAAGTTGCAGGCAGCAAGCCACAAAGTAGCAATGGTTGGAGATGGAATAAACGACTCTCCAGCTCTAGCAGCGGCTGACGTCGGAATAGCGATAGGAGCAGGAACAGACGTAGCCATTGAAGCTGCTGACATTGTTCTGATAAAAAGCAACTTAGAAGATGTAATAACAGCCATCGATCTTTCCAGAGAAACCTTCTCTCGAATTCGTTTGAACTACATTTGGGCTCTAGTTTATAACCTCCTCGGCATTCTGATCGCAGCCGGTTGCCTATTTCCGGCGACCAGATTGAGATTACCACCGTGGGTTGCTGGAGCTGCTATGGCTGCTTCTTCAGTCAGCGTCGTTTGTAGCTCTCCCATGTTGAGATTTTACAAGAGACCAAAGAAGCTGGAGATAAACAATCTTCAGATGAATGGAATCACCATTGAATGA 2565 43.27 MTCTACSTAVEQNLQSINGVERAAVALAIEEAEIHYNSEIVKPETLLQSIQDSGFAPTLLAIGEHSSKIELKIEGLRTDDSMAIIENSLKSVVGIQDTVADPTLGKISISYRPDMVGPRTFIEVIESIKSGAFKATIFPQERRDSYREKEIKQYFRSFLWSFAFAIPVFLTSMVFMYIPTIERALDTKVWNMMTIGMIVRWELATPVQFFIGRRFYVGAYKSLRHGSANMDVLVALGTNAAYFYSVYIIIRSVSSPHFEGTDFFETSTMLISFILLGKYLEVLAKGKTSEAIGKLMNLAPETATLLSLDEGENVVSEREIDSRLIQKNDVIKVLAGEKVGSDGYVVWGESCVNESMITGEAKPVGKKKGDAVIGGTVNENGVLHVRATRVGSDSALSQIVRLVESAQMAKAPVQKFADTISKFFVPIVIALSLLTWVTWYLTGKFNLYPKPWIPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGATQGVLIKGGLALESTHKVNCIVFDKTGTLTVGKPMVVREMLFKDMKLDHLLILVGATEVNSEHPVGKAIVHYAKNCRDGEEHSSSWPEAKNFISIAGQGVKATVKNKEVIVGNKSLMINHNIAIPIEAQNFLAEAETMAQTGVIVAIDGEVEGAFAISDTLKPGAKEVISILNSMKVKSIMVTGDNWGTANSIAMEVGIETVMAEAKPEQKADKIKKLQAASHKVAMVGDGINDSPALAAADVGIAIGAGTDVAIEAADIVLIKSNLEDVITAIDLSRETFSRIRLNYIWALVYNLLGILIAAGCLFPATRLRLPPWVAGAAMAASSVSVVCSSPMLRFYKRPKKLEINNLQMNGITIE 854
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 20753187 20762592 - BLOR09663 Blo19g00320 74461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo19g00320 854 PRINTS Copper-transporting ATPase 1 signature 193 213 - -
Blo19g00320 854 PRINTS Copper-transporting ATPase 1 signature 158 179 - -
Blo19g00320 854 PRINTS Copper-transporting ATPase 1 signature 48 68 - -
Blo19g00320 854 PRINTS Copper-transporting ATPase 1 signature 19 42 - -
Blo19g00320 854 PRINTS Copper-transporting ATPase 1 signature 213 238 - -
Blo19g00320 854 PRINTS P-type cation-transporting ATPase superfamily signature 353 367 - -
Blo19g00320 854 PRINTS P-type cation-transporting ATPase superfamily signature 517 531 - -
Blo19g00320 854 PRINTS P-type cation-transporting ATPase superfamily signature 746 758 - -
Blo19g00320 854 PRINTS P-type cation-transporting ATPase superfamily signature 723 742 - -
Blo19g00320 854 PRINTS P-type cation-transporting ATPase superfamily signature 670 680 - -
Blo19g00320 854 Pfam Heavy-metal-associated domain 1 55 IPR006121 GO:0046872
Blo19g00320 854 SUPERFAMILY HAD-like 516 828 IPR036412 -
Blo19g00320 854 SUPERFAMILY HMA, heavy metal-associated domain 63 132 IPR036163 GO:0046872
Blo19g00320 854 SUPERFAMILY HMA, heavy metal-associated domain 1 61 IPR036163 GO:0046872
Blo19g00320 854 ProSitePatterns E1-E2 ATPases phosphorylation site. 519 525 IPR018303 -
Blo19g00320 854 CDD HMA 1 58 IPR006121 GO:0046872
Blo19g00320 854 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 230 831 IPR027256 GO:0006812|GO:0016021|GO:0019829
Blo19g00320 854 Gene3D - 65 138 - -
Blo19g00320 854 Gene3D - 1 59 - -
Blo19g00320 854 PANTHER ATP7, ISOFORM B 1 843 - -
Blo19g00320 854 Gene3D - 528 656 IPR023299 GO:0000166
Blo19g00320 854 ProSiteProfiles Heavy-metal-associated domain profile. 1 59 IPR006121 GO:0046872
Blo19g00320 854 SUPERFAMILY Calcium ATPase, transduction domain A 317 403 IPR008250 -
Blo19g00320 854 Pfam E1-E2 ATPase 298 495 - -
Blo19g00320 854 Gene3D - 508 773 IPR023214 -
Blo19g00320 854 Pfam haloacid dehalogenase-like hydrolase 513 737 - -
Blo19g00320 854 Gene3D - 285 407 - -
Blo19g00320 854 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 270 802 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo19g00320 854 SFLD C1.7: P-type atpase like 499 774 - -
Blo19g00320 854 SFLD p-type atpase 499 774 IPR044492 -
Blo19g00320 854 CDD P-type_ATPase_Cu-like 156 819 - -
Blo19g00320 854 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 1 843 - -
Blo19g00320 854 ProSiteProfiles Heavy-metal-associated domain profile. 68 137 IPR006121 GO:0046872
Blo19g00320 854 SUPERFAMILY Calcium ATPase, transmembrane domain M 262 801 IPR023298 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo14g00277 Blo-Chr14:2744415 Blo19g00320 Blo-Chr19:20753187 0 dispersed
Blo14g00278 Blo-Chr14:2761531 Blo19g00320 Blo-Chr19:20753187 0 dispersed
Blo16g00012 Blo-Chr16:707425 Blo19g00320 Blo-Chr19:20753187 0 dispersed
Blo16g00844 Blo-Chr16:35658624 Blo19g00320 Blo-Chr19:20753187 3.22E-70 dispersed
Blo19g00320 Blo-Chr19:20753187 Blo16g00851 Blo-Chr16:35845816 2.84E-26 dispersed
Blo19g00320 Blo-Chr19:20753187 Blo01g01443 Blo-Chr1:53333028 1.74E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo19g00320 K17686 - qsu:112004769 1190.25