Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo19g00327 ATGGATAGAGAGCTCTGTGAAGACAAATCAAGAAACACAGTTTCTTCTACGGGCTTTTGCTATTCGTCGGCGGCAGCCGGCAACCCGAGTTTCCAAACCCACTTCACAAACCAGATCCAGGGGTTCGAGCCCAACCCAGCTGAGATCTTCAGCTTGACTACAAACATGGAGATGGTAGGGTTTTCAAAGAATCTCCACCAGCAAACCGGAAGTAGCTCAGTTCAATGGAAAGGATTTTCTACAAAGTCTAACTTTGGATCTTCCTCTTCAAAAATGATCAACGAATCGTCCAGTTTCTACGATCATGATTACGATAAGCAAGACTTTACCAGCACCAGTGAGAATCTAATGGCTGGAGTTGGACCAGAAACTGGAGCATGGCAAGAGAATAGATTCTTCCTCGATGATTCTTCTTTAAGGTGTGTTCTTAATCGCCAAGGAAACGAAAGGCCTAGCCATGGTCTTTCGCTTTCTCTTTTTTCAGATAATCCTTCTGGTATCGGATTACATTCGTTTGTTGAACTGAGGCAAAGCCAAGAAGCTGATGAAAGATTTTTTCACCTTGGGGCCTCGAAATACTTGATTCCAACGCAACAGCTTTTAAATGAATTCTGCAGCCTTGGATTGAGGCATGATGTTGGAGAGAAGAAGGGTCCTAAAACCAAACAGTGGGTAGAAGAAAATTCTACTGCTTCATTGAGAAAGCAGTCTCTTCAATCCCTTGATTTCATCGAATTACAGAAGAGAAAAACAAGGCTGTTTTCGATGATGGAAGAGCTGGAGCGTAGATACAAGCACTACTGCGACCAAATGAAAATGGTGGTGTCTTCATTTGAAGCAGTGGCCGGAGATGGAGCTGCGAATGTGTATTCGGCTTTGGCCTGCAAGGCTTTGTCGAGGCATTTCAGGTGTTTGAAAGATGCGATAGTGACGCAGATTCAGGCTGTGAAGAAGGCAATGGGAGAGAAAGATCAGCAGGCTTCAGCGCCGGGGGCGTCAAAGGGGGAAACGCCGAGGCTGCGCATTCTTGATCAGACGCTTAGACAGCAACGGGCTTTCCAGCAAATGAGCTTGATGGAGAGCCATCCATGGCGGCCCCAACGTGGCCTTCCTGAACGATCCGTTTCCATTCTCCGAGCTTGGCTGTTCGAGCACTTTCTTCACCCGTATCCAAGCGACGTTGATAAACATATTCTGGCCCGCCAAACTGTGAGGCTGTGGAAGCCAATGGTGGAAGATATGTACCTGGAAGAAGTAAAGGGGCAAGAAAACACCTTGAGCTCCTCCGACGGAGGCATTGACGTCGACAACAGAGGAAGAGCCCGGCTGGAAGACCAAAAGCCGACGGCCGACCAACTCCTTAGAATTAACTCCGACTGCCTTTCCTCTATCATCAACAACCCACCAAAAAATGACACAAAACCCTCCAAAACCATGCAAAACCACCACCACCAACAACAAAATTTCAGCTCATTTGGGATGATGGAGCTTGACTTCTCTTCCTACAATCACCACTCATCCGGAGCTTTTTCCTACGCAAGTGACAGTCAAGTAAATCATAATTTCAATGGCAGCGGGGAAGGTGTCTCGTTGACACTAGGGCTGCAACAGCACGGCGGTAATGGGTCTGGGAGCTTGGCATTTACTTCCCCCCCTCAAACTAACTCTCTCTTCTACCCTAGAGATTCCATGGAAGAATGCCAACCAGCTGTTCACTACTCTCTTTTAGATGGAGAAGCCCAGAATTTGCCTTACAGAAACTTAATGGAGGCACAGATGTTCCAGGATTTGGCTGGATAA 1800 47.06 MDRELCEDKSRNTVSSTGFCYSSAAAGNPSFQTHFTNQIQGFEPNPAEIFSLTTNMEMVGFSKNLHQQTGSSSVQWKGFSTKSNFGSSSSKMINESSSFYDHDYDKQDFTSTSENLMAGVGPETGAWQENRFFLDDSSLRCVLNRQGNERPSHGLSLSLFSDNPSGIGLHSFVELRQSQEADERFFHLGASKYLIPTQQLLNEFCSLGLRHDVGEKKGPKTKQWVEENSTASLRKQSLQSLDFIELQKRKTRLFSMMEELERRYKHYCDQMKMVVSSFEAVAGDGAANVYSALACKALSRHFRCLKDAIVTQIQAVKKAMGEKDQQASAPGASKGETPRLRILDQTLRQQRAFQQMSLMESHPWRPQRGLPERSVSILRAWLFEHFLHPYPSDVDKHILARQTVRLWKPMVEDMYLEEVKGQENTLSSSDGGIDVDNRGRARLEDQKPTADQLLRINSDCLSSIINNPPKNDTKPSKTMQNHHHQQQNFSSFGMMELDFSSYNHHSSGAFSYASDSQVNHNFNGSGEGVSLTLGLQQHGGNGSGSLAFTSPPQTNSLFYPRDSMEECQPAVHYSLLDGEAQNLPYRNLMEAQMFQDLAG 599
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 21528906 21531610 - BLOR09670 Blo19g00327 74468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo19g00327 599 Coils Coil 243 263 - -
Blo19g00327 599 Pfam Associated with HOX 188 310 IPR006563 -
Blo19g00327 599 Gene3D - 370 420 - -
Blo19g00327 599 SMART prehox3 182 311 IPR006563 -
Blo19g00327 599 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 6 550 - -
Blo19g00327 599 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 6 550 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo19g00327 Blo-Chr19:21528906 Blo12g00899 Blo-Chr12:27179806 8.18E-55 dispersed
Blo05g00608 Blo-Chr5:16317913 Blo19g00327 Blo-Chr19:21528906 1.56E-75 transposed
Blo19g00327 Blo-Chr19:21528906 Blo03g00346 Blo-Chr3:7592596 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo19g00327 - - tcc:18606572 732.635