Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00056 ATGGATCTGGAAGGTGGAGTAAATGTAAACTGTGCTCAGTTGCAGACTCAATCGTGGAAGACAATACTTACTCTTGGCTATCAGAGCCTTGGAGTCGTCTATGGCGATTTAAGCACTTCTCCCCTCTACGTGTTTAGAAACACTTTCGCGGAAGGAGATATTGAACACACGGCTTCAAACGAAGAGATATACGGCGTTTTGTCCTTCGTTTTCTGGACTCTCACCATTATTCCTCTACTCAAATATGTTTTCATCGTTCTCAAGGCGGATGATAACGGCGAGGGAGGGACTTTTGCTCTCTACTCCTTACTCTGTCGACACGCCCAACTCGGGTCGTTGCCGAATGTTCAGGTAGCAGATGAGGAACTCGTGTACAAGAAGGATTCCATTAATTCACCTCCCCATGCAAGTTTTGCTTCCAAGCTGAAGTCCACTTTGGAAACTCATAGGGTTTTGCAGAGATTTTTGCTTGTCATGGCTTTGATTGGGACTTGTATGGTGATTGGCGATGGCATCCTCACACCAGCCATTTCTGTTTTATCTGCGGTTTCGGGCATAGAATACACCATGGCCAAACAGCATCACAAATATGTGGAAATCCCAGTTACATGCATCATATTGATAGGCCTGTTCGCCCTTCAACATTACGGCACGCACCGGGTCGGGTTCATGTTTGCTCCTATTGTAACCACCTGGCTTCTGTGCATTAGCACTATTGGACTTTACAATATTATTTACTGGAATCCACACGTGTATCAAGCTCTGTCTCCTCATTACATGTTCCAATTTTTGAGGAAAACTCAACGAGGAGGTTGGGTGTCACTGGGCGGAATTTTGCTATGTATAACTGGTTCAGAGGCTATGTACGCCGATCTTGGTCACTTCTCTCAATTTTCAATTAAGCTTGCTTTCACCTTTATGGTTTACCCATCTTTGATTCTGGCTTACTTGGGGCAAGCTGCTTATCTTTCTCAAAATCATACTCTCCCAGATGATTATCGAATCGGTTTTTATGTATCTGTACCAGAGAAATTAAGATGGCCTGTTCTAGTAATTGCCATACTTGCTGCAGTAGTAGGAAGCCAAGCCATTATCACTGGAACTTTCTCCATCATTAAACAATGCTCTTCTTTAGGATGCTTCCCTAAAGTCAAAATAGTCCATACTTCATCGAAAATCCACGGTCAGATTTACATCCCGGAAATCAACTGGACCTTGATGCTGTTGTGTTTGGCCGTGACGATCGGTTTTAGAGACACCACGCGCTTAGGGAATGCTTCGGGTTTGGCTGTCATTACAGTGATGTTGGTAACAACCTGCCTAATGTCTCTCGTCATCGTCCTTTGTTGGCATCAAAGTGTTCTTCTTGCAATTGGCTTCATATTCTTCTTCGGAACCATCGAAGCTCTCTACTTCTCAGCTTCTCTCATCAAGTTCCTTGAAGGAGCTTGGGTCCCAATCGCCCTCGCGTTATTCTTCTTGGTCGTCATGTACGTCTGGCATTATGGTACGCAAAAGAAGTACGAATTCGATTTAGAAAATAAAGTCTCCATTAATTGGCTTCTCAGTCTTGGGCCGAGTTTAGGTATAGTAAGAGTGCGGGGCATCGGCATTATAAACACCGAGCTCGAGTCAGGCATCCCAGCCATTTTTTCCCATTTTGTCACCAATCTTCCTGCCTTCCACCAAGTCCTCGTTTTTCTATGCATCAAATCCATCCCACTTGCTCATGTTAGACCCGAGGAGAGATTTCTCGTGGAACGTGTTGGCCCCCGCGAGTTTAGGCTCTACCGATGCGTCGTCCGATATGGATATCGCGATGTGCACAAGGACAATATTGAGTTTGAGAAAGATCTTCTATGTAGCATAGCAGAGTACATAAGGTCGGAAAGCATCAATAACAATGGCAGCAGAATTATAGGCAAGGAGGACAATAAAATGGCGGTTGTGGGGACTACTTCTACCCACACGCACAGAATTCAAATGAAAGAAGATTACACAAATCTTGAAGATGTGGCTGGAACATCGGAGCTCCGAGAAATAAAATCTCCGCCGAAGCTCCAACCGAGGAAAAGGGTGAGATTTATTTTGCCAGAGAGTCCGATAATCGACAGGGAGAATATGAACGAATTGAAGGACCTGATGGAAGCACGGGAGGCGGGAATTGCGTATATTTTAGGACGGTCTCACATGAAAGCAAAGCATGGATCAAGCATGGTAAAAAAGCTTGTAATTAACTATGGCTACGAGTTCTTGAGAAAAAACAGCAGAGAACCGAGCCACCCTCTTACTTTATCCCATGCATCCACTCTAGAAGTGGGGATGCTGTACAATGTTTAG 2340 44.57 MDLEGGVNVNCAQLQTQSWKTILTLGYQSLGVVYGDLSTSPLYVFRNTFAEGDIEHTASNEEIYGVLSFVFWTLTIIPLLKYVFIVLKADDNGEGGTFALYSLLCRHAQLGSLPNVQVADEELVYKKDSINSPPHASFASKLKSTLETHRVLQRFLLVMALIGTCMVIGDGILTPAISVLSAVSGIEYTMAKQHHKYVEIPVTCIILIGLFALQHYGTHRVGFMFAPIVTTWLLCISTIGLYNIIYWNPHVYQALSPHYMFQFLRKTQRGGWVSLGGILLCITGSEAMYADLGHFSQFSIKLAFTFMVYPSLILAYLGQAAYLSQNHTLPDDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSSLGCFPKVKIVHTSSKIHGQIYIPEINWTLMLLCLAVTIGFRDTTRLGNASGLAVITVMLVTTCLMSLVIVLCWHQSVLLAIGFIFFFGTIEALYFSASLIKFLEGAWVPIALALFFLVVMYVWHYGTQKKYEFDLENKVSINWLLSLGPSLGIVRVRGIGIINTELESGIPAIFSHFVTNLPAFHQVLVFLCIKSIPLAHVRPEERFLVERVGPREFRLYRCVVRYGYRDVHKDNIEFEKDLLCSIAEYIRSESINNNGSRIIGKEDNKMAVVGTTSTHTHRIQMKEDYTNLEDVAGTSELREIKSPPKLQPRKRVRFILPESPIIDRENMNELKDLMEAREAGIAYILGRSHMKAKHGSSMVKKLVINYGYEFLRKNSREPSHPLTLSHASTLEVGMLYNV 779
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 588421 591751 + Bma000223.1 Bma01g00056 74573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00056 779 PANTHER POTASSIUM TRANSPORTER 6 1 779 - -
Bma01g00056 779 Pfam K+ potassium transporter 27 607 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bma01g00056 779 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 779 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bma01g00056 779 TIGRFAM kup: potassium uptake protein 25 779 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g00056 Bma06g00625 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00056 Bma-Chr1:588421 Bma14g01510 Bma-Chr14:30429315 0 dispersed
Bma02g01216 Bma-Chr2:54237310 Bma01g00056 Bma-Chr1:588421 0 transposed
Bma01g00056 Bma-Chr1:588421 Bma06g00625 Bma-Chr6:33387765 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00056 K03549 - rcu:8261016 1235.71