Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00089 ATGGCCGCAAAGTCTGACTCGGTGTCGATCCGGGTTCCATACAGAAACCTGAGAGATGCAGAGGTAGAATTGGCAAGTTTGGATGAGCCTCGCCACCAACGTATTGAGCTCACTTCAACGTCGCCTTCTTCTTCCGGTAGAGTTTCCGAGGGCAGCTCCAACATTTCACCGTCAAATCCTCCTGTGCGACCCAAGCATAGCAGATTGATTACTCTAATTCTTAGTTGTATGGTCGCTGCTGGTGTTCAATTCGGCTGGGCCTTGCAACTTTCTCTTCTAACTCCTTATATACAGACTCTTGGGATAGAGCATGCTTTCTCTTCATTTATTTGGCTTTGTGGCCCTATTACAGGTCTTGTGGTTCAACCATGTGTTGGTATCTGGAGTGATAAATGTTATTCAAAATATGGAAGGCGACGACCATTTATTCTTGCGGGATCCTTTCTTATCTCAGTCGCTGTGGTATTAATCGGATTTTCTGCAGACATTGGATATTTATTAGGGGATACAAATGAAGACTGCAGAACATTCAAAGGTACTCGAGTAAGGGCAGCTTTTGTGTTTATTATTGGATTCTGGATGCTAGATCTTGCTAATAATACAGTGCAGGGACCAGCTCGTGCTCTTCTGGCTGATCTCTCAGGCCCTGAGCAACGCAATACAGCAAATGCAGTCTTTTGTTCATGGATGGCTGTTGGAAACATACTAGGATTCTCTTCTGGAGCTAGTGGAAATTGGCATAGATGGTTTCCCTTCCTGTTGACTAGAGCTTGCTGTGAAGCCTGTGGGAATCTTAAAGCAGCATTTCTTGTTGCAGTGATATTCTTGACATTATGTACTCTTGTGACCATATATTTTGCTGATGAAGCTCCACTTATTAGAAATGAACCACAACGTCTATCGGATTCTGCTCCTTTGTTGAATGATCATCCACAAAATGGTCTGGACCTATTAAAGTCTAAACCCCACATGACTTTTAAACACAATGCCAATGGCAATGATAAAGAGTTTGACTATGAAAGGAGTCAAAACTTGAAGGATAGTGGTTCAAAAATTGAGGAAGATTCAAGCGAAAGTTTTAATGACGGCCCCTGGAGGAGTGCTAGTCAAATTGCTTACCAGCTTAAGGAATTTACCACCTCCCATGTATTCAGTACTTATTGTTATGGCTCTTACTTGGTTGGCATGGTTTCCCTTCTTTCTTTTTGA 1209 42.68 MAAKSDSVSIRVPYRNLRDAEVELASLDEPRHQRIELTSTSPSSSGRVSEGSSNISPSNPPVRPKHSRLITLILSCMVAAGVQFGWALQLSLLTPYIQTLGIEHAFSSFIWLCGPITGLVVQPCVGIWSDKCYSKYGRRRPFILAGSFLISVAVVLIGFSADIGYLLGDTNEDCRTFKGTRVRAAFVFIIGFWMLDLANNTVQGPARALLADLSGPEQRNTANAVFCSWMAVGNILGFSSGASGNWHRWFPFLLTRACCEACGNLKAAFLVAVIFLTLCTLVTIYFADEAPLIRNEPQRLSDSAPLLNDHPQNGLDLLKSKPHMTFKHNANGNDKEFDYERSQNLKDSGSKIEEDSSESFNDGPWRSASQIAYQLKEFTTSHVFSTYCYGSYLVGMVSLLSF 402
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1005691 1010530 - Bma000254.1 Bma01g00089 74606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00089 402 PANTHER SUGAR TRANSPORTER 40 365 - -
Bma01g00089 402 SUPERFAMILY MFS general substrate transporter 68 302 IPR036259 -
Bma01g00089 402 CDD MFS_SLC45_SUC 72 322 - -
Bma01g00089 402 Pfam Major Facilitator Superfamily 78 301 IPR011701 GO:0022857|GO:0055085
Bma01g00089 402 Gene3D MFS general substrate transporter like domains 63 328 IPR036259 -
Bma01g00089 402 MobiDBLite consensus disorder prediction 28 64 - -
Bma01g00089 402 PANTHER SUCROSE TRANSPORT PROTEIN SUC3 40 365 - -
Bma01g00089 402 MobiDBLite consensus disorder prediction 36 61 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00089 Bma-Chr1:1005691 Bma05g00740 Bma-Chr5:43572069 2.05E-78 dispersed
Bma01g00089 Bma-Chr1:1005691 Bma01g02572 Bma-Chr1:83321177 2.83E-76 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00089 K15378 - jre:108988791 525.398