Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00106 ATGGGAACGGAGAGCAGGTTTTTACCAGTTTCGTCTCCCTCTGAAAGGTATTACATTGGTAGTCTGATTGTCGTTTTAGTATCATCCTGGATCATCATCCATAGATGGAGCCAAAGGAAGAAGAAAGGTCCAAAAACATGGCCGCTCGTCGGAGCAGCGATTGAGCAGTTAAGAAACTACGATAGAATGCACGATTGGCTTGTCGAATATCTTTCCAAGTCCAACACAGTGGCGGTCCCTATGCCCTTCTGCACTTACACATATATTGCAGACCCTGCAAATGTAGAACACATCCTCAAGACCAACTTTGCAAATTATCCCAAGGGTCAAGTGTACCATTCGTACATGGAAGTGCTGCTTGGAGATGGAATCTTCAACGTTGACGGGGAGCTCTGGAGGAAACAAAGGAAGACGACAAGCTTTGAGTTTGCATCGAAGAATTTGAGGGATTTCAGCACCATTGTCTTCAGAGAGTATAGCCTGAAGCTCTCCACTATTTTAAATCAATCTTCTCGCAACAATCAAGCAGTCGACATGCAGGAAATAAAGCATGACATTCTATCGAGATTCATCGAGTTAGGGAAAGATGAGGAAAACAATTTCACAAACAAAAGCCTCAGAGACGTAGTCCTGAATTTCGTCATTGCTGGAAGAGACACAACGGCGACGACACTCAGTTGGGCGATATACATGATAATGAGCCATGAAAATGTAGCAGAGAAGCTCTACTCGGAGCTAAAAACTTTTGAGGAAGAACGGGCAAAAGAAGAGAACATTTGCTTGCTCAAGGAGCATGAAAAGGATGGCAATGACCCGAAAGGGGTATTGGAAGACGACGTGTTACCGGATGGAACCAAAGTGAAAGCAGGAGGAATGGTGACTTACGTACCGTATTCGATGGGGAGGATGGAGTACAACTGGGGCCCTGACGCCTCCAATTTCAACCCCGAGAGGTGGCTCAAAGAAGGCTCCTTCCAAAACGCGTCTCCCTTCAAGTTCACTGCCTTCCAGGCCGGACCGAGGATATGCCTCGGAAAAGACTCAGCCTATCTGCAAATGAAGATGGCACTAGCCATTTTGTGTAGGTTTTACAAGTTCCATTTGGTACCTGGCCACCCTGTAAAGTATAGAATGATGACAATTCTATCAATGGCTCATGGCTTGAAGCTTACCGTAGCTAGACGCTCTTAA 1191 45.68 MGTESRFLPVSSPSERYYIGSLIVVLVSSWIIIHRWSQRKKKGPKTWPLVGAAIEQLRNYDRMHDWLVEYLSKSNTVAVPMPFCTYTYIADPANVEHILKTNFANYPKGQVYHSYMEVLLGDGIFNVDGELWRKQRKTTSFEFASKNLRDFSTIVFREYSLKLSTILNQSSRNNQAVDMQEIKHDILSRFIELGKDEENNFTNKSLRDVVLNFVIAGRDTTATTLSWAIYMIMSHENVAEKLYSELKTFEEERAKEENICLLKEHEKDGNDPKGVLEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDASNFNPERWLKEGSFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALAILCRFYKFHLVPGHPVKYRMMTILSMAHGLKLTVARRS 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1110007 1112172 - Bma000270.3 Bma01g00106 74623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00106 396 PANTHER CYTOCHROME P450 704B1 23 182 - -
Bma01g00106 396 PANTHER CYTOCHROME P450 704B1 183 259 - -
Bma01g00106 396 Gene3D Cytochrome P450 270 395 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00106 396 PRINTS P450 superfamily signature 334 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00106 396 PRINTS P450 superfamily signature 216 233 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00106 396 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00106 396 Gene3D Cytochrome P450 30 181 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00106 396 PANTHER CYTOCHROME P450 183 259 - -
Bma01g00106 396 PANTHER CYTOCHROME P450 270 394 - -
Bma01g00106 396 SUPERFAMILY Cytochrome P450 33 395 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00106 396 PANTHER CYTOCHROME P450 704B1 270 394 - -
Bma01g00106 396 PRINTS E-class P450 group I signature 205 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00106 396 PRINTS E-class P450 group I signature 225 251 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00106 396 PRINTS E-class P450 group I signature 333 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00106 396 PRINTS E-class P450 group I signature 343 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00106 396 PANTHER CYTOCHROME P450 23 182 - -
Bma01g00106 396 Pfam Cytochrome P450 43 181 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00106 396 Pfam Cytochrome P450 173 252 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00106 396 Pfam Cytochrome P450 273 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00106 396 Gene3D Cytochrome P450 182 264 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00106 396 Coils Coil 232 259 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00106 Bma-Chr1:1110007 Bma13g00120 Bma-Chr13:1236337 1.64E-23 dispersed
Bma01g00106 Bma-Chr1:1110007 Bma01g01955 Bma-Chr1:72312069 1.38E-19 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00106 K20495 - han:110923306 346.665