Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00115 ATGTATAGGACTGTTGATGAGGCGGCAGCTTCGACCACAACCGCGACGGTGAGCAAAGGAGGATCACCGTCGGATAGTGTGGATTATGTGGTTACTTTGGATCAGGTTCCGCGGTGGAGCGATGCAGAATTTAGATCTTCACTGGAACTGGAATGCGAAGATGCTTCTTTCTCTAATTCCTACTTCCCTGATCCTTTGACCTCTTTGTCTGGGCTAGAGAGTGGTGTAAATGGAATGGTTTCGAGATTTCCGGTCGATCACGAAATTAATTCCAAGATATATCTTTGGAGAGGGAATCCATGGAATCTCGAGGTAGATGCTGTGGTCAATTCTACAAATGAGAGTTTGGATGAGGCAAACAGCAGCACAGGATTGCACTCTGCAGCTGGATCTGGTCTTGCCGAAGAATGTGCTTCCATGGGTGGTTGTCGGACAGGGATGGCAAAAGTAACTAATGCATATGACCTTCCGGCTAGGAAGGTCATACATACTGTTGGTCCAAAGTATGCAGTAAAATATCATACAGCAGCAGAGAATGCTTTAAGTCATTGTTATCGATCTTGCCTTGAACTTCTTATTGAAAATGGACTTCAAAGCATTGCAACAGGCTGTATATACACCGAGAATAAAAACTATCCTCGTGAACCTGCTGCGCATGTGGCTATAAGGACTGTGAGGCGGTTTCTTGAGAAGCAAAAAGATAAAATTAAAGCAGTTGTATTTTGTACCGCCACATCATCAGACACTGAGATATACAAGAGGTTGCTTCCCCTTTACTTTCCACGTGATAAACATGAAGAGGAAATTGCTATATCAAAGCTTCCTGCAGATGTAGGAGATGAGAATGGCGAGACTATCATAGATGAACGAAAGATCAGGATAAAGCCTTTGCCGAAAAAGAATATTCCAAGACCTCCCCAAGCCCCTGATGATCCTCCTATTAGTAGTGTTGGCTTGGCACGAAGGAGTTCTTCCTATTTGGATTCATATTTGGATCCTGCTTTTATGTCTTTAATCAAAGACCCCGATCAGAGACGCAGAGAGCAATGGGAAAAAACTGCTCAGGCGCAGAGTGGATGGAATTGTGCTAAGATGCTTGGATTTGGAGATCTTGGTGGACCTCCGCTATCTGCCGCCGAAGAATACTCACTTCATTCAAGATATCTTGCTAAAGCAAATTCTATAAACTTGTCTGAAATTGCAGAAATGAAAATAATTTATCGTGGTGGTGTTGATAGTGAGGGTCATCCGGTAATGGTTGTTGTTGGAGCACATTTTCTCCTGCGATGCCTTGATCTGGATCGTTTTGTTCTTTATGTCATAAAGGAATTTGAGCCATTGATACAGAAGCCTTATACAATTGTCTACTTCCATTCGGCAGCATCTTTGCAGCCCCGACCTGACATGGGATGGATGAGAAGACTACAACAAATACTTGGCCGCAAACACCAGCGTAATCTTCACGCCATCTATGTTCTTCATCCATCATTTGGACTAAAGACTACAATTTTTGCCATGCAACTGTTTGTAGACAATGTGGTATGGAACAAAGTGGTGTACGTCGATAGGCTTCTGCAGTTGTTTCGATACGTTCCTCGTGAACAGTTGACTATTCCAGATTTTGTCTTCCAGCATGACTTGGAAGTAAATGGAGGGAAGGGCATTATAGTCGACCCTCGAACAAAATATGTCTATCATCGACCATAA 1707 43.23 MYRTVDEAAASTTTATVSKGGSPSDSVDYVVTLDQVPRWSDAEFRSSLELECEDASFSNSYFPDPLTSLSGLESGVNGMVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNESLDEANSSTGLHSAAGSGLAEECASMGGCRTGMAKVTNAYDLPARKVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIENGLQSIATGCIYTENKNYPREPAAHVAIRTVRRFLEKQKDKIKAVVFCTATSSDTEIYKRLLPLYFPRDKHEEEIAISKLPADVGDENGETIIDERKIRIKPLPKKNIPRPPQAPDDPPISSVGLARRSSSYLDSYLDPAFMSLIKDPDQRRREQWEKTAQAQSGWNCAKMLGFGDLGGPPLSAAEEYSLHSRYLAKANSINLSEIAEMKIIYRGGVDSEGHPVMVVVGAHFLLRCLDLDRFVLYVIKEFEPLIQKPYTIVYFHSAASLQPRPDMGWMRRLQQILGRKHQRNLHAIYVLHPSFGLKTTIFAMQLFVDNVVWNKVVYVDRLLQLFRYVPREQLTIPDFVFQHDLEVNGGKGIIVDPRTKYVYHRP 568
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1160504 1166108 - Bma000279.1 Bma01g00115 74632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00115 568 MobiDBLite consensus disorder prediction 295 317 - -
Bma01g00115 568 SUPERFAMILY Macro domain-like 81 289 IPR043472 -
Bma01g00115 568 CDD Macro_GDAP2-like 91 259 IPR035793 -
Bma01g00115 568 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 11 548 - -
Bma01g00115 568 Gene3D - 398 549 IPR036865 -
Bma01g00115 568 Pfam Macro domain 109 221 IPR002589 -
Bma01g00115 568 MobiDBLite consensus disorder prediction 1 24 - -
Bma01g00115 568 SUPERFAMILY CRAL/TRIO domain 397 536 IPR036865 -
Bma01g00115 568 Gene3D Leucine Aminopeptidase, subunit E, domain 1 22 265 IPR043472 -
Bma01g00115 568 PANTHER APPR-1-P PROCESSING ENZYME FAMILY PROTEIN 11 548 - -
Bma01g00115 568 ProSiteProfiles Macro domain profile. 80 260 IPR002589 -
Bma01g00115 568 SMART sec14_4 396 545 IPR001251 -
Bma01g00115 568 CDD SEC14 403 539 IPR001251 -
Bma01g00115 568 Pfam Divergent CRAL/TRIO domain 415 546 IPR001251 -
Bma01g00115 568 SMART YBR022w_8 92 221 IPR002589 -
Bma01g00115 568 MobiDBLite consensus disorder prediction 7 24 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g00115 Bma06g00726 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00080 Bma-Chr6:1280153 Bma01g00115 Bma-Chr1:1160504 2.14E-13 transposed
Bma10g00227 Bma-Chr10:2063696 Bma01g00115 Bma-Chr1:1160504 6.21E-11 transposed
Bma10g00276 Bma-Chr10:2498142 Bma01g00115 Bma-Chr1:1160504 2.93E-11 transposed
Bma01g00115 Bma-Chr1:1160504 Bma06g00726 Bma-Chr6:38218978 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00115 K24997 - mnt:21400244 1004.97