Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00126 ATGATTCAGAGCGACTGTTTCTGGTTCATTCCGACGACAGTGTTTCAGTTTCATGTAAGCTTCGGAACGCTGCTTTGTGTTTTGCTTTTCGTGGCGGTTTTTGGCCTTTTTCTCGCTCCGGGAGGGCTTGCATGGGCTTTATCCAAGTCTGCGACGATACGTGGCCCCTCTGGTTTTTTGCTCACCGGTTTGCTCAACGTCTTCAACGGTAGCACCCCTCATAGAGCGCTTGCAAAACTGGCTGCGAGGTTTAACTCTCTGCCTCTAATGGCGTTTTCCGTCGGCTTTACTCGTTTTATCATCTCTAGCCGCCCCGAAACTGCGAAAGAGATTCTGCACAGTTCTGCTTTTGCTGATAGGCCGTTAAAGGAGTCGGCTTACGAGCTACTGTTTCACAGAGCGATGGGGTTTGCGCCATATGGTGAGTACTGGAGAAACTTAAGGAGAATATCTGCTACCCACTTGTTTTGCCCGAAAAGAATAGCCGGTTTCGAAGGTCTACGGCGAGAAATAGGTCTGAAAATGGCGGAAGATATAATGAGTTCAATGGCTGAAAACGGCGAGGTTAAAATAAAGAAAATCATCCATTTTGGATCACTAAACAATGTCATGATGACAGTGTTTGGGCGTCGCTATGATTTCGGTGAAACTGGAAATGGCATTGAGCTGGAGGCTATGGTGGCTGAAGGGTACGAGCTGCTGGGGATTTTCAACTGGAGCGACCATTTTCCTCTTATAGGATGGTTGGATTTGCAGGGAGTAAGAACGAGGTCCAGAAAACTAGTCTCGGAGGTCAATTTATTTGTAGGAAAGATCATTGAAGATCATAGAAAGAAGAGAGCCGAAGGATTTGAAGGTTCTGTAAAAGATTTTGTTGACGTTTTGCTTGATTTGGAGGAAGAAGACAAGCTTACTGACTCTGATATGACAGCTGTTTTATGGGTTAGTTCTTCTTCCTTGTCTGAAATGATCTTTCGAGGAACTGATACAATCGCCATTCTTCTGGAATGGATTCTGGCAAGAATGGTCTTACACCCAGAAATTCAACTGAAAGCCCAGGCTGAAATCGATCAAGTGGTCTGTTTTTCAGAAGCCATAACGGATTCGCACATTCAAAATCTGTCATATCTCCAATGTATCGTCAAGGAATGTCTCAGAATGCATCCACCTGGGCCTCTTCTGTCGTGGGCGCGTCTCGCCATTCACGACGTTTATATCGCCGGAGCTTTCGCCATTCCGGCAGGGACGACCGCCATGGTCAACATGTGGGCAATAACTCACGACCCAATGATTTGGCCGGAGCCTAACCAGTTTAAACCGGAGCGGTTCGTCGAACAGGACGTAAGTTTGTTGGGTTCTGATTTGGCGTTGGCTCCGTTCGGAGCTGGAAGAAGGGTATGTCCAGGAAAAACCATGGCGTTGGCCACTATCCACCTCTGGCTCGCTCACTTGCTTCGAACGTTTACGTGGGTTCGTTCGAACGAGAAGGAAGTTGATTTAACAGAGGTCCTCAAGCTCTCTCTGGAGATGAAGACGCCATTGATTTGCAAGGCCATTCCTAGGTCTTCTTTCTGA 1575 47.11 MIQSDCFWFIPTTVFQFHVSFGTLLCVLLFVAVFGLFLAPGGLAWALSKSATIRGPSGFLLTGLLNVFNGSTPHRALAKLAARFNSLPLMAFSVGFTRFIISSRPETAKEILHSSAFADRPLKESAYELLFHRAMGFAPYGEYWRNLRRISATHLFCPKRIAGFEGLRREIGLKMAEDIMSSMAENGEVKIKKIIHFGSLNNVMMTVFGRRYDFGETGNGIELEAMVAEGYELLGIFNWSDHFPLIGWLDLQGVRTRSRKLVSEVNLFVGKIIEDHRKKRAEGFEGSVKDFVDVLLDLEEEDKLTDSDMTAVLWVSSSSLSEMIFRGTDTIAILLEWILARMVLHPEIQLKAQAEIDQVVCFSEAITDSHIQNLSYLQCIVKECLRMHPPGPLLSWARLAIHDVYIAGAFAIPAGTTAMVNMWAITHDPMIWPEPNQFKPERFVEQDVSLLGSDLALAPFGAGRRVCPGKTMALATIHLWLAHLLRTFTWVRSNEKEVDLTEVLKLSLEMKTPLICKAIPRSSF 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1238269 1239910 + Bma000291.1 Bma01g00126 74643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00126 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Bma01g00126 524 PRINTS E-class P450 group I signature 421 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00126 524 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00126 524 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00126 524 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00126 524 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00126 524 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00126 524 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00126 524 Gene3D Cytochrome P450 47 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00126 524 Pfam Cytochrome P450 55 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00126 524 SUPERFAMILY Cytochrome P450 55 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00126 524 PANTHER CYTOCHROME P450 78A7-RELATED 16 521 - -
Bma01g00126 524 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00126 524 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00126 524 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00126 524 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00126 524 PANTHER CYTOCHROME P450 78A5 16 521 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00126 Bma-Chr1:1238269 Bma09g00984 Bma-Chr9:49367464 1.13E-80 dispersed
Bma08g00248 Bma-Chr8:3100752 Bma01g00126 Bma-Chr1:1238269 0 transposed
Bma14g00102 Bma-Chr14:1425675 Bma01g00126 Bma-Chr1:1238269 8.16E-165 transposed
Bma01g00126 Bma-Chr1:1238269 Bma08g00238 Bma-Chr8:2919290 6.31E-72 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00126 K20619 - qsu:111986572 719.153