Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00127 ATGGATCAACGCCGGATCCGCTCGCCCAAATCGGAGCTGTACTCGACCGTTGTTATCCATTCTGATTCCGACTCCGATCATAATCAAAACGAACGGAAATCCGGCAAGGCAGCCGGGAAAAAGACACAGAAACAAGACCTATACGCTACTATGATTTACAAGAATGACGGGGATGAAGACGAAGATGATTCTTCTCTCCCTCCCCTCCTCAAACGTCTCCCCAAGGACTTTGGTGGTGGATCTTCAATTGACTACGAAGAAGGTGGCGGTTACGAGTCTGATAGTTACGCGGGTGATTTCGGGACTATGATTGTGAAGACAGAACGGAATCGACCACAGAGAGGTGGTGTTGCTGATGGAGGCAGGAGCGGCAGCGATGACGAGGACGGCGACGACGGTGATAAGTTTTCGACCTTTGTGGTAAGGTCTACAATGAGGTCGAGCGTGAGAGAATCTGTGAGCGGTACTGTTTTGAGGACAGGTGACTCTGCAAGAGGAGAACTTGAAGGGTCAAATATGGGGATCGCTGTGGCGAGCATGCAGGAGCTCGGAGATGTGGGCTTTGGTAAGCAGAGGAAAAGGAGCGGCTCCTACTCGTCGCTGGGTGAAGAGGGCGGACGCCAACACTCGAAAGTATCTTCAAGTTCGATTCCTGACAGCGTTACCAGGGAAGATCCTTCAACTAAGTATGAATTACTCAATGAGCTCGGAAAAGGATCTTATGGGGCTGTTTACAAGGCCAGAGATATTAAAACTTCTGAACTTGTTGCTATCAAAGTCATATCGTTATGTGAAGGAGAGGAAGGATATGAGGAAATTCGTGGTGAGATTGAGATGTTGCAGCAATGTAGTCATCCAAATGTTGTCCGTTACCTTGGAAGTTACCAAGGAGAAGAATACCTTTGGATAGTGATGGAGTATTGTGGTGGAGGAAGTGTTGCTGATTTGATGAATGTTACCGAGGAACCTTTAGAGGAGTACCAAATAGCATATATTTGTCGGGAAGCATTGAAGGGTCTTTCTTATCTACACTCCATATTCAAGGTTCATAGAGATATTAAAGGTGGTAATATATTGCTAACGGAACAAGGAGATGTCAAGTTGGGCGATTTTGGAGTTGCAGCACAACTAACTCGGACCATGTCAAAGCGTAACACATTTATTGGCACTCCTCATTGGATGGCTCCAGAAGTTATTCAAGAGAGTCGTTATGATGGAAAGGTGGATGTATGGGCTCTTGGTGTTTCAGCTATCGAAATGGCTGAGGGACTTCCTCCAAGATCTGCAGTGCATCCAATGAGGGTTCTGTTCATGATATCAATTGAGCCAGCTCCAATGCTCGAGGACAAAGAAAAATGGTCTCTGGTGTTCCATGACTTTATTGCAAAAAGCCTAACAAAGGAACCACGTTTACGTCCCACTGCAAGTGAGATGTTGAAGCACAAATTTATTGAGAAATGCAAGAGTGGGGCGTTGGCAATGCTGACTAAGATTGAAAAGGCTAGGCAAATTAGAGCTGCAATGGCACTGCAAGTGCAGAATTTTGTTCCAGCCGCTCCTGGAGATAGTACATTATTGCCTTCAAAGGTGAATGAGGATTATGGCGATACTGTTCCTTCCAGACCCCAGAATATTGGTATTCAAGGGGAAAATAAAGTACCTACAGTCAGCTCTTTGTCGAAGCAGCAGATATCAGAAGGCACGGACCAAGCCTCTGAAGGTAACTTTGCAACTATTATAATTCATGGTGGAGATGACTTAGATAACGCACCTTTTGAGACAATGGTTAACAATGCTGAAACTTCAACTGCGTGTGAAAATGATGAAAGCTCTTCTATCAGTGGCAATGGAGGCTTGATTAACTACAGTATTAACCAATTGTTTGGTATGCATTTCAGGCAGGATTTCACTAGTGCCAAGGCAAATAATGTCTCAAATGTAGAGTCTGATCCCCTTATGGCTGGCACACTGAACCAAAATAATAGCACAAAAGATCATTCTCAAGCACAGATCGGCAGTCATGTTGGTCTCAACAGTAACACACTGAAGAATGAAACTGCAAGCCGAAAGGCCTTTGCATTGCAAGATAAACTCTGGTCTATATATGCAGCTGGTAATACTGTACCTATTCCATTCTTGCGGGCAACTGATATATCTCCAATAGCTCTCTTATCTGACAATGTTTTTGGAAACACGGATCGGGATGGCGCAGGAGCTTCAGCCATGGAAGCAATACATGAGCTTTTTACTGGAGATGGACAGTCCAAAAAGGGTCGTAGGGGACAAAACGAGATGCCCCTTCCTCCTAGTGTCTACCAAAGATTAACTTCAAGTTCAACCTTGTTAAATCTCGCACAGGCCTTAGCTTATCACAAAACTCTGAAAGCGAGAGCTATGAAAAGAAGCAGAACAGTCTCCGTTACATGTCTTCTCAGGTTCCTCGCTTCCGCTCAATCTTCGTCTCTTTCGGAACTTCCTATCATTACCCTTCCAGCTAAACAATGTGCCCTCCAAAACTCTCTCTCTTCGCCATTCTCTCTCCCCTCTTCCAAACCCAATTCCATATTTTTCTCATCTGCTACCGTTCGCTTTTTAACTACCAAAGTCCACACAGACGTCGAGAACAGTGAAAAGGAAGAAGACCCTTTTCACTATTGGACTGATGAAGAAAAAGAAACATCTGATGGTTGGGAAGAAGAAGAAGACGTAGAGCCCGAGATTGGGGACGGAGGCGATGGTGGCGGAGTTGTGTTGCAAGGCGTTCCATGGGGGGAGCAGGCTCTTTCTCTAGCCCATGATGTCCTGCTGCGATTTGCTGATGACATAAAACTATTCTCTTTTAAGACTACTCCTCGCGGATACATCTACGTGAGGCTTGATAAATTATACGGGTGTCCTACAATCGAAGAGCTCGAAAGCTTCAACAGAGAATTGAAGAAAAGATTAGACGAAGCTGGAGAACTAGGAGAAATTCCAGATGATCTGGCTCTCGAGGTGTCGACCCCTGGTGCGGAGAGGCTCCTTAAGATACCAGACGAACTGGATCGATTTAAAGACATGCCAATGTGTGTACGATACAACGAAGGTGAGCTGTCGAAATGGGCAGAAAAAGATGGAATCTTCATGCTGGAATCTGTGGAAACAAGTTCAGAAATATGTGTGTGGAAGTTGGCAAACATAAAGGAAAATAGAGATCCTTTAAGTAAGGGTAGGCCGTTGAGCAGAAAACAGAGAGATTGGAGATTGAATCTTCCATTTGATATGCATAAAAAGGTGACTTTGTACCTTGAATGTTGA 3297 44.8 MDQRRIRSPKSELYSTVVIHSDSDSDHNQNERKSGKAAGKKTQKQDLYATMIYKNDGDEDEDDSSLPPLLKRLPKDFGGGSSIDYEEGGGYESDSYAGDFGTMIVKTERNRPQRGGVADGGRSGSDDEDGDDGDKFSTFVVRSTMRSSVRESVSGTVLRTGDSARGELEGSNMGIAVASMQELGDVGFGKQRKRSGSYSSLGEEGGRQHSKVSSSSIPDSVTREDPSTKYELLNELGKGSYGAVYKARDIKTSELVAIKVISLCEGEEGYEEIRGEIEMLQQCSHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTEEPLEEYQIAYICREALKGLSYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGLPPRSAVHPMRVLFMISIEPAPMLEDKEKWSLVFHDFIAKSLTKEPRLRPTASEMLKHKFIEKCKSGALAMLTKIEKARQIRAAMALQVQNFVPAAPGDSTLLPSKVNEDYGDTVPSRPQNIGIQGENKVPTVSSLSKQQISEGTDQASEGNFATIIIHGGDDLDNAPFETMVNNAETSTACENDESSSISGNGGLINYSINQLFGMHFRQDFTSAKANNVSNVESDPLMAGTLNQNNSTKDHSQAQIGSHVGLNSNTLKNETASRKAFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVFGNTDRDGAGASAMEAIHELFTGDGQSKKGRRGQNEMPLPPSVYQRLTSSSTLLNLAQALAYHKTLKARAMKRSRTVSVTCLLRFLASAQSSSLSELPIITLPAKQCALQNSLSSPFSLPSSKPNSIFFSSATVRFLTTKVHTDVENSEKEEDPFHYWTDEEKETSDGWEEEEDVEPEIGDGGDGGGVVLQGVPWGEQALSLAHDVLLRFADDIKLFSFKTTPRGYIYVRLDKLYGCPTIEELESFNRELKKRLDEAGELGEIPDDLALEVSTPGAERLLKIPDELDRFKDMPMCVRYNEGELSKWAEKDGIFMLESVETSSEICVWKLANIKENRDPLSKGRPLSRKQRDWRLNLPFDMHKKVTLYLEC 1098
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1244103 1256984 + Bma000292.2 Bma01g00127 74644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00127 1098 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 172 800 - -
Bma01g00127 1098 MobiDBLite consensus disorder prediction 188 228 - -
Bma01g00127 1098 MobiDBLite consensus disorder prediction 1 92 - -
Bma01g00127 1098 Gene3D Transferase(Phosphotransferase) domain 1 226 515 - -
Bma01g00127 1098 Pfam Protein kinase domain 230 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00127 1098 MobiDBLite consensus disorder prediction 24 40 - -
Bma01g00127 1098 SUPERFAMILY Protein kinase-like (PK-like) 229 485 IPR011009 -
Bma01g00127 1098 ProSiteProfiles Protein kinase domain profile. 230 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00127 1098 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 172 800 - -
Bma01g00127 1098 ProSitePatterns Protein kinases ATP-binding region signature. 236 259 IPR017441 GO:0005524
Bma01g00127 1098 MobiDBLite consensus disorder prediction 106 136 - -
Bma01g00127 1098 MobiDBLite consensus disorder prediction 193 223 - -
Bma01g00127 1098 Coils Coil 968 988 - -
Bma01g00127 1098 Hamap Ribosome maturation factor RimP [rimP]. 925 1098 IPR003728 GO:0042274
Bma01g00127 1098 CDD STKc_MAP4K3_like 229 484 - -
Bma01g00127 1098 MobiDBLite consensus disorder prediction 892 908 - -
Bma01g00127 1098 MobiDBLite consensus disorder prediction 888 912 - -
Bma01g00127 1098 SMART serkin_6 230 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00127 Bma-Chr1:1244103 Bma14g00255 Bma-Chr14:3020751 2.25E-73 dispersed
Bma02g00281 Bma-Chr2:3242822 Bma01g00127 Bma-Chr1:1244103 1.17E-40 dispersed
Bma08g01215 Bma-Chr8:51190674 Bma01g00127 Bma-Chr1:1244103 7.06E-09 dispersed
Bma01g00127 Bma-Chr1:1244103 Bma12g00255 Bma-Chr12:3305310 2.97E-55 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66240 PF00069 Pkinase 2.90E-66 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00127 - - mnt:21409099 1005.36