Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00129 ATGGCGGAAGCTTCAGTCAAACCGACGCCTCTTCTGAAAGATGAGCTTGATATCGTCATCCCCACGATTAGAAACCTGGATTTCTTAGAGATGTGGAGGCCGTTTTTCCAGCCGTACCATCTGATAATCGTTCAGGACGGCGACCCTTCGAAAATTATCAAGGTTCCAGATGGCTTCGACTACGACCTCTACAATCGAAACGACATCAATCGGATTTTGGGTCCCAAGGCGTCTTGCATTTCCTTCAAAGACTCTGCTTGTCGCTGCTTCGGCTACATGGTTTCTAAGAAGAAGTATATTTACACCATTGACGATGATTGCTTCGTCGCCAAAGATCCAACTGGGAAGGATATCAATCCGTTTTTTTTCAACACTCTTTACGATCCGTATCGAGATGGTGCAGACTTTGTTCGTGGATATCCATTCAGTCTTCGTGAGGGTACTCCAACTGCTGTTTCTCACGGACTTTGGCTTAATATCCCCGATTATGACGCCCCAACTCAACTCGTTAAACCTCGTGAGAGGAACACGAGGTTTGTTGATGCAGTCTTAACAATTCCCAAGGGAACTTTATTCCCCATGTGTGGAATGAATCTGGCTTTCGATCGAGAGCTTATCGGACCGGCTATGTACTTTGGACTCATGGGCGATGGTCAGCCGATTGGGCGATACGACGATATGTGGGCTGGCTGGTGTGTGAAGGTTATTTGTGACCATCTCGGGTTGGGGGTGAAGACGGGTTTGCCATATATTTGGCACAGCAAAGCAAGCAATCCATTTGTGAACCTTAAGAAGGAATACAAGGGAATCTTCTGGCAAGAAGAAATCATTCCATTTTTTCAAACTGCAAGTCTTTCAAAAGATTGCACTACAGTTCAAAAATGCTATATTGAACTGTCAAAGCAAGTGAGGGAGAAGCTTGCGAAGGTTGATCCTTACTTCGTCAAGCTAGCAGACGCCATGGTTACTTGGATTGAAGCTTGGGATGAGCTCAACAACTAA 1002 45.51 MAEASVKPTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKIIKVPDGFDYDLYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPTGKDINPFFFNTLYDPYRDGADFVRGYPFSLREGTPTAVSHGLWLNIPDYDAPTQLVKPRERNTRFVDAVLTIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIPFFQTASLSKDCTTVQKCYIELSKQVREKLAKVDPYFVKLADAMVTWIEAWDELNN 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1260216 1262805 + Bma000294.2 Bma01g00129 74646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00129 333 SUPERFAMILY Nucleotide-diphospho-sugar transferases 37 232 IPR029044 -
Bma01g00129 333 PIRSF UPTG 6 333 IPR004901 GO:0016866|GO:0071669
Bma01g00129 333 Pfam Reversibly glycosylated polypeptide 12 332 IPR037595 -
Bma01g00129 333 PANTHER UDP-ARABINOPYRANOSE MUTASE 3 3 332 - -
Bma01g00129 333 PANTHER UDP-ARABINOSE MUTASE 3 332 IPR037595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00129 Bma-Chr1:1260216 Bma06g00745 Bma-Chr6:38627713 0 dispersed
Bma01g00129 Bma-Chr1:1260216 Bma02g00451 Bma-Chr2:6931912 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00129 K13379 - qsu:112009791 659.833