Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00139 ATGGCTTCTCGGTTGAACCTCATCATCCTTCTCCTTCTCTTCTCCTTCGTCTTCCCTGCCTTCTCCCAATCTCAATCTGAAACTCAGTCGTCCAACTGTGGCCCCCAAGACGTCGTCGGGGAAAGATGCTACGATACGGCTACGGCATTGAGGCTCAAGCTCATCGCCATTGCTTCTATTTTACTCACCAGCACCATCGGAGTTTCTCTCCCCATCTTTTCTCGCTCCGTTCCCGCTTTGCATCCCGACCGCGATCTCTTTTCTGTCGTCAAAGCCTTCTCTTCCGGCGTAATTCTTGCCACTGGTTACATGCACGTCCTCCCCGATTCCTTCAACTGTCTGAGTTCTCTTTGTTTGCCAGAAAATCCATGGAGGAGGTTTCCTTTCACTACATTCGTGGCGATGCTGTCGGCTCTGTTCACTTTGATGATAGATTCGTTTTCCATGAGCTATTACAGGAAACGATTTCTTCGTCAGGGAAATGAAAATGGCGGCGAAAAGGGAAAGGAGATGAGCAAATTGGAATCGGATCGCCAAAACCACATGCACGGGATCAGCACTGGCAGTAAAGATGATGGCAGCGAAAGGAGCTCGCAGTTGCTCCGGCATCGCGTGGTTGCTCAGGTACTGGAAATGGGGATAGTGGTGCATTCGGTGGTAATAGGGTTGTCGATGGGAGCGTCTGAGAATCCATGCACGATCAGGCCACTCATCGCTGCTCTTTGCTTCCATCAGCTCTTCGAAGGAATGGGCCTCGGAGGCTGCCTTTTGCAGGCAGAGTACGGAAGGACGATGAAAGCCGTGATGGTGTTCTTCTTCTCGATCACAACGCCGGTGGGAATAGCGCTGGGAATAGGACTGACGAAGGTGTACAGCGAGAGCAGCCCCGCGGCGCTCATAGTGGTGGGTCTGCTGAACGCATCGTCGGCTGGTTTGCTCAACTACATGGCTTTGGTTGATCTTCTGGCCGCTGATTTCATGGCTCCTAAGCTTCAATCAAGCTTCAGGCTTCAACTGTGGGCCTATTTCGCTGTCTTTTTAGGAGCCGGAGGGATGTCCGTCATGGCCATATGGGCCTAG 1080 52.13 MASRLNLIILLLLFSFVFPAFSQSQSETQSSNCGPQDVVGERCYDTATALRLKLIAIASILLTSTIGVSLPIFSRSVPALHPDRDLFSVVKAFSSGVILATGYMHVLPDSFNCLSSLCLPENPWRRFPFTTFVAMLSALFTLMIDSFSMSYYRKRFLRQGNENGGEKGKEMSKLESDRQNHMHGISTGSKDDGSERSSQLLRHRVVAQVLEMGIVVHSVVIGLSMGASENPCTIRPLIAALCFHQLFEGMGLGGCLLQAEYGRTMKAVMVFFFSITTPVGIALGIGLTKVYSESSPAALIVVGLLNASSAGLLNYMALVDLLAADFMAPKLQSSFRLQLWAYFAVFLGAGGMSVMAIWA 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1340926 1342193 + Bma000304.1 Bma01g00139 74656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00139 359 Pfam ZIP Zinc transporter 51 356 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Bma01g00139 359 PANTHER FE(2+) TRANSPORT PROTEIN 1 22 359 - -
Bma01g00139 359 TIGRFAM zip: ZIP zinc/iron transport family 42 359 IPR004698 GO:0005385|GO:0016021|GO:0071577
Bma01g00139 359 MobiDBLite consensus disorder prediction 162 196 - -
Bma01g00139 359 PANTHER ZINC/IRON TRANSPORTER 22 359 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00139 Bma-Chr1:1340926 Bma01g01684 Bma-Chr1:49007575 3.80E-125 dispersed
Bma01g00139 Bma-Chr1:1340926 Bma01g00924 Bma-Chr1:9022119 1.76E-90 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00139 K14709 - rcu:8264630 462.996