Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma01g00140 | ATGGAGGTAAGAAGAGAGAGTGTGTATTTGTGTTGTTTGGCTCTGTCTTGCTTATGGGCTGCTGCAAATTGCTTGCTCTCTGCCAAAGGAGTAAACTACGAAGTTCAAGCTTTAATGGGAATCAAGGCAGCTCTGAAGGATCCTCACTCTGTTCTGAACTGGGATGAAAATGCTGTGGATCCATGTAGCTGGAGTATGATCACTTGCTCTGCTGATAACTCTGTCATTGGTCTAGGAGCTCCAAGCCAGAATTTTTCTGGCAGTCTTTCACCCAGTATAGGAAACTTGACAAATCTGCAGTTTGTGATGCTTCAGGACAATAATATATCTGGGAAGCTCCCAACTGAAATTAGCAAGTTATCGAAGCTTCAAACGCTGTACCTTTCGAGTAACTTCTTCTCCGGTGTAATTCCGGGCTCTCTCTCCCGTTTGAACAATCTCCAGTACCTGAAGCTTAACAACAACACTCTTTCGGGTGCTATTCCTTTGTCATTCTCCAACATGTCCCAGCTGGTCTTGCTGGACCTTTCGTATAATAACTTGAGCGGTCAAGTACCCTTGTTAATGGCTAAATCATTCAATTTGGCCGGAAATCCTCTGATATGTGGCGGCAGAACAAAGCAAGACTGCGATGGAATGATGATGCCACTATCTTTGGCAGTCAATTCCTCTCAAAGTTCTCAATCTTTAGGGAGACCAAAAGGCCAGAAAATTGCTCTAGCATTTGGGACTAGCTTAGGCTCCATTTGTCTGCTAACTTTGGGCTATGGCTTCTTCTTCTGGTGGAGGCAAAGGAAAAACCAACAGATATTCTTCGATTTCAATGAGCCTCATCACGAACACGTTTGCTTAGGAAATCTGAAGAAATTCCACTTCCGAGAACTCCAAAATGCAACCAACAATTTCAGCAGCAAGAACCTGATCGGGAAGGGGGGATTCGGAAATGTATACAAAGGAATTCTTCAAGACGGAAGCGTGGTGGCGATCAAAAGACTGAAAGACGGGAACGCCATCGGAGGGGAGATCCAGTTTCAGACTGAATTAGAGATGATTAGCTTAGCAGTTCATCGGAATCTCCTCCGACTGTATGGGTTTTGCACGACGGCTTCTGAGAGACTCCTTGTTTATCCATACATGTCTAATGGAAGCGTTGCTTCCCGCCTCAAAGCAAAACCAGCCCTAAATTGGGGAACAAGAAAGAGAATCGCCTTAGGAGCAGCAAGAGGGTTGTTATACTTGCACGAACAGTGCGACCCCAAAATTATTCATCGCGATGTTAAGGCTGCAAACATACTGCTCGATGATTATTGCGAGGCTGTGGTCGGAGATTTCGGGCTTGCAAAACTGTTAGACCATCGAGATTCCCATGTGACAACTGCCGTGAGAGGAACCGTCGGCCACATCGCACCGGAGTATTTATCGACTGGCCAATCCTCCGAGAAGACTGACGTTTTCGGATTTGGAATTCTCCTTCTCGAGTTGATTTCCGGACAGAGAGCTCTTGAATTTGCTAAAGCTGCGAATCAAAAAGGCGCCATGCTTGATCTGGTGAGCAATGAGCATAACATAATTAGATTTGATCCTGCCATCAGAGGATTTTTTTTCTCATTGTTTATATTCCTGCAGGTTAAGAAAATTCACCAAGAGGGGAAGCTAGAACAGCTAGTTGACAAGGATCTGAAAAGTAATTACGACCGAATTGAGCTCGAAGAAATAGTTCGAGTAGCTCTGCTGTGCACACAATTTCTTCCAATCAATCGCCCGAAGATGTCCGAAGTGGTTCGAATGCTGGAAGGAGACGGATTGGCTGAAAAATGGGAGGCTTCGCAAAGAGCAGACTCAAGCAGGTGTAGAGCCAACGATTTCTCCTCGTCGGAGCGTTACTCCGATCTTGCCGATGATTCTTCATTGCTTACACAAGCAATGGAGCTTTCTGGACCTAGATAA | 1947 | 45.25 | MEVRRESVYLCCLALSCLWAAANCLLSAKGVNYEVQALMGIKAALKDPHSVLNWDENAVDPCSWSMITCSADNSVIGLGAPSQNFSGSLSPSIGNLTNLQFVMLQDNNISGKLPTEISKLSKLQTLYLSSNFFSGVIPGSLSRLNNLQYLKLNNNTLSGAIPLSFSNMSQLVLLDLSYNNLSGQVPLLMAKSFNLAGNPLICGGRTKQDCDGMMMPLSLAVNSSQSSQSLGRPKGQKIALAFGTSLGSICLLTLGYGFFFWWRQRKNQQIFFDFNEPHHEHVCLGNLKKFHFRELQNATNNFSSKNLIGKGGFGNVYKGILQDGSVVAIKRLKDGNAIGGEIQFQTELEMISLAVHRNLLRLYGFCTTASERLLVYPYMSNGSVASRLKAKPALNWGTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGQRALEFAKAANQKGAMLDLVSNEHNIIRFDPAIRGFFFSLFIFLQVKKIHQEGKLEQLVDKDLKSNYDRIELEEIVRVALLCTQFLPINRPKMSEVVRMLEGDGLAEKWEASQRADSSRCRANDFSSSERYSDLADDSSLLTQAMELSGPR | 648 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 1343567 | 1346332 | - | Bma000305.1 | Bma01g00140 | 74657 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma01g00140 | 648 | ProSiteProfiles | Protein kinase domain profile. | 302 | 583 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma01g00140 | 648 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 543 | 648 | - | - | |
Bma01g00140 | 648 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 4 | 521 | - | - | |
Bma01g00140 | 648 | Pfam | Protein kinase domain | 303 | 514 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma01g00140 | 648 | Gene3D | Transferase(Phosphotransferase) domain 1 | 379 | 617 | - | - | |
Bma01g00140 | 648 | PANTHER | PROTEIN NSP-INTERACTING KINASE 2-LIKE | 543 | 648 | - | - | |
Bma01g00140 | 648 | PANTHER | PROTEIN NSP-INTERACTING KINASE 2-LIKE | 4 | 521 | - | - | |
Bma01g00140 | 648 | Gene3D | Ribonuclease Inhibitor | 31 | 212 | IPR032675 | - | |
Bma01g00140 | 648 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 421 | 433 | IPR008271 | GO:0004672|GO:0006468 | |
Bma01g00140 | 648 | SUPERFAMILY | Protein kinase-like (PK-like) | 278 | 598 | IPR011009 | - | |
Bma01g00140 | 648 | Pfam | Leucine rich repeat | 122 | 181 | IPR001611 | GO:0005515 | |
Bma01g00140 | 648 | SMART | serkin_6 | 302 | 583 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma01g00140 | 648 | Gene3D | Phosphorylase Kinase; domain 1 | 271 | 378 | - | - | |
Bma01g00140 | 648 | Pfam | Leucine rich repeat N-terminal domain | 32 | 70 | IPR013210 | - | |
Bma01g00140 | 648 | SUPERFAMILY | L domain-like | 34 | 196 | - | - | |
Bma01g00140 | 648 | ProSitePatterns | Protein kinases ATP-binding region signature. | 308 | 330 | IPR017441 | GO:0005524 | |
Bma01g00140 | 648 | MobiDBLite | consensus disorder prediction | 607 | 626 | - | - | |
Bma01g00140 | 648 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 17 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g00140 | Bma-Chr1:1343567 | Bma07g00724 | Bma-Chr7:18574395 | 0 | dispersed | |
Bma06g00611 | Bma-Chr6:32622271 | Bma01g00140 | Bma-Chr1:1343567 | 3.89E-14 | dispersed | |
Bma01g00140 | Bma-Chr1:1343567 | Bma06g01441 | Bma-Chr6:51107230 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66241 | PF00069 | Pkinase | 1.30E-42 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma01g00140 | - | - | csin:114282611 | 967.222 |