Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bma01g00150 | ATGGCTTTTGCCTTGCTTTCGCAAATTCCACTTCTCTTTTTTGCCAGAGTTTCAGGTTTTTTGGTTGCTGTTCTGGTTCTGTTCTGGGCTCTCGGCTTCAAATCTAGCTTTATTCCTCGATCTTCCTCTCAAGAGGACCTCATTTATGCTGTTCTTCATCCTATATTTATGGTGATTGGTTTCATTCTCATCAGTGGAGAAGCTATTTTGGTACATAGATGGTTTCCTGGTTCAAGAAATTTGAAGAAATCTGTGCATTTATGCCTGCAAGGCGTGGCTTTGACTTCTGGGATTTTTGGAATTTGGACTAAATTTCATGGACAAGATGGGATTGTAGCTAATTTCTTTAGCCTCCATTCTTGGATGGGTCTCATTTGTGTCTCCCTCTTTGGAGCTCAGTGGATTATGGGCTTTCTAAGCTTTTGGCATCGAGGGGAGGGTCGAACGACGAGAATAAGAGTACTTCCCTGGCATATATTCCTGGGTCTATACACGTATGGTTTAGCAGTGGCAACAGCAGAGACTGGGCTGCTGGAGAAGTTGACATTTTTACAGGCAAAGAGGAATGGCCCCAGACACAATCCAGAGGCCATGGTTGTCAACAGTTTAGGATTGGGATTAGCTCTGCTCAGTGGGATTGTAATATTCAGCGCTGTTTCACCCAAACACCATAGCCTTGGAGCTAAACTAATATACTCAGATAACAAATCCCACTCTTCTGAATAA | 726 | 43.11 | MAFALLSQIPLLFFARVSGFLVAVLVLFWALGFKSSFIPRSSSQEDLIYAVLHPIFMVIGFILISGEAILVHRWFPGSRNLKKSVHLCLQGVALTSGIFGIWTKFHGQDGIVANFFSLHSWMGLICVSLFGAQWIMGFLSFWHRGEGRTTRIRVLPWHIFLGLYTYGLAVATAETGLLEKLTFLQAKRNGPRHNPEAMVVNSLGLGLALLSGIVIFSAVSPKHHSLGAKLIYSDNKSHSSE | 241 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 1396823 | 1398924 | + | Bma000316.1 | Bma01g00150 | 74667 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bma01g00150 | 241 | SMART | 561_7 | 52 | 177 | IPR006593 | - | |
| Bma01g00150 | 241 | CDD | Cyt_b561_ACYB-1_like | 42 | 185 | - | - | |
| Bma01g00150 | 241 | PANTHER | TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 4-RELATED | 5 | 238 | - | - | |
| Bma01g00150 | 241 | Pfam | Eukaryotic cytochrome b561 | 52 | 183 | IPR006593 | - | |
| Bma01g00150 | 241 | Gene3D | - | 1 | 227 | - | - | |
| Bma01g00150 | 241 | PANTHER | CYTOCHROME B561-RELATED | 5 | 238 | IPR043205 | GO:0016491 | |
| Bma01g00150 | 241 | ProSiteProfiles | Cytochrome b561 domain profile. | 14 | 219 | IPR006593 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bma01g00150 | Bma-Chr1:1396823 | Bma08g00335 | Bma-Chr8:5843934 | 2.25E-39 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bma01g00150 | K08360 | - | csin:114257102 | 373.244 |