Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00209 ATGGCTTATAATAGGCTGTTTGTGCCTATGAAACTGCCTTCGAATTTTACGCAGTTAAGAAAATTGACGTATTTGTTTATGCATCAATCAAATTTGATCGGTGAACTCCCCAAATCAATTGGAGACATGGCTGCTTTGGAGTTCTTGGATTTATCCGGCAACAGCTTAACCGGAAAGTTACCTAGTGGTTTGTTCACATTAAAGAATCTCAGTGAATTGTATTTGTTCGACAACCAACTGTCCGGCGGAATCCCCTCAGTAATTGAAACTACAAAGATAACGCAGCTCGATCTTTCCGATAACAATTTGACAGGGACATTACCAGATGATTTTGGAAAGCTTCAGCTACTGACGAAGCTATCTTTGTTCATGAATCAATTTTCCGGTGAGATCCCACCTAGCATCGGCCGTCTTCCTGCGCTGGTAGTCCTAAGATTGTTCGACAACAATTTCTCCGGCGCATTGCCTGCTGATTTGGGGAGGTATTCAGCGCTCAAAAGCCTCGACGTCGCAAGAAACAGACTAGCAGGAAGCATACCGGAGCACTTGTGCAGCGGCGGTGAGTTCGTCGGGTTGGCAGCTTACGACAATAATCTTAGTGGAGGATTACCGAAATCTTTTGGAAACTGCAGTAGTTTGTCTTTCGTCAATGTATATAATAATAACTTGTCCGGCAAACCTCCCAGTGGTTTTTGGACGGCGTTAAATCTCTCTACAGTCCTTCTATACAACAATTCTCTCACTGGCGAGCTTCCAGCGCGAGTATCAGCGTATCTTTCTCGATTGGAGATCAGTAACAACAAATTTTCCGGTATAATTCCGCCACAGATATCATCTTGGAGAAACTTGCAGGTGTTCTTCGCGAGTAACAACCTACTTACAGGCCCAATTCCTCAAGAACTGACTTCTCTTCCAGCTCTGAACGCCCTTGCGCTTGATCAGAACCAGTTATCCGGCAACCTTCCGGTGGATAAAAATTCATTACAGTCATTAACTTTTCTTAACCTCAGCCATAATCAGCTCTCCGGAGAAATCCCAGAAGAAATTGGTCTTCTCCCAGATCTTACAGCTCTGGACCTATCCGTAAATCAATTTTCTGGGCAGATTCCGGCTCAACTTGGCCGGTTAATGTTCAATTTTCTTAATCTTTCTTCTAATCATCTTACAGGGATGATACCAACCGAGCTAGAAAACTCAGCTTATGATAACAGCTTCTTGAATAATCCTGGTCTGTGCTCAAGCAACTCACTTCTCAACATCAACGTCTGCAATTCCCGACTGGAAAATTCGAGCAAACTATCTTCCCACCATCTAGCTTTGATCATTAGTTCAACAGTTGCAGTTTTTGTGTTATCAGTCATATGTTTACTCTTCCTGATCAGGTTCTACAAATACAGAAATCTGGGAGTTGATTCGATATGGAAGTTGACGGCTTTCCAGAAGCTGAACTTTACAGAATCAACGATTTCGTCAGGATTGACAGAGAAGAACCTTATCGGAAGTGGAGGATCCGGGAAAGTTTACTGTGTTCCGGTGAGTCCTCAGGACGATGTGGTTGCCGTGAAAAGGATATGGAATAACAGGAAAGTTGAGCAGAGATTGGAGAAACAATTCATGGCGGAAGTTGAGATTCTGAGTTCAATCCGCCATTGCAACATCGTCAAGCTCCTCTGCGTTATTTCAAACGACAATACAAAGCTTCTGGTCTATGAATACCTGGCAAACCAGAGCCTGGACAAATGGCTGCACAGAAAAACCAGACCATCTGACTTCTCCGTTCTAGATTGGTCGAAGAGAATTCAGATTGCCGTGGGAGCTGCCAGAGGCCTCTGTTACATGCACTCTGTCTGCTCTCCTCCTGTAATTCATCGAGACTTGAAATCCAGCAACATTTTATTGGATTCAGAATTCCACGCAAAAATTGCAGATTTCGGTCTTGCCCAGATCTTAATCAAGCAAGGTGAAGCCGTAACAATGTCCGCCGTAGCTGGCTCTTTCGGCTACATAGCGCCAGAATATGCTCAGACTAGGAGGGTAAACGAGAAAATTGACGTCTACAGCTTTGGAGTAATTCTCTTAGAGCTTGTGACCGGAAAAGAAGCCCATGATGGAGACGAAAGCACTAACCTTGCAGATTGGGCGTGGCGCCATATTCAGGGGGGAAAAGCCATAGTAGAAGCTCTGGACGAGGAAATAAAAGAGCCACTTTATGTCGAAGAAATGAGCTCTGTTTTTAAGCTTGGGATATTATGTACAGCTACTCAGCCCTCCTCGAGGCCTTCCATGAAAGATGTTCTGCAAATACTCCAACGCTGTAACACCCATCAAAGCTCGGCAGATAAGAAGATCACGGCCGAAAGACGATGA 2367 44.28 MAYNRLFVPMKLPSNFTQLRKLTYLFMHQSNLIGELPKSIGDMAALEFLDLSGNSLTGKLPSGLFTLKNLSELYLFDNQLSGGIPSVIETTKITQLDLSDNNLTGTLPDDFGKLQLLTKLSLFMNQFSGEIPPSIGRLPALVVLRLFDNNFSGALPADLGRYSALKSLDVARNRLAGSIPEHLCSGGEFVGLAAYDNNLSGGLPKSFGNCSSLSFVNVYNNNLSGKPPSGFWTALNLSTVLLYNNSLTGELPARVSAYLSRLEISNNKFSGIIPPQISSWRNLQVFFASNNLLTGPIPQELTSLPALNALALDQNQLSGNLPVDKNSLQSLTFLNLSHNQLSGEIPEEIGLLPDLTALDLSVNQFSGQIPAQLGRLMFNFLNLSSNHLTGMIPTELENSAYDNSFLNNPGLCSSNSLLNINVCNSRLENSSKLSSHHLALIISSTVAVFVLSVICLLFLIRFYKYRNLGVDSIWKLTAFQKLNFTESTISSGLTEKNLIGSGGSGKVYCVPVSPQDDVVAVKRIWNNRKVEQRLEKQFMAEVEILSSIRHCNIVKLLCVISNDNTKLLVYEYLANQSLDKWLHRKTRPSDFSVLDWSKRIQIAVGAARGLCYMHSVCSPPVIHRDLKSSNILLDSEFHAKIADFGLAQILIKQGEAVTMSAVAGSFGYIAPEYAQTRRVNEKIDVYSFGVILLELVTGKEAHDGDESTNLADWAWRHIQGGKAIVEALDEEIKEPLYVEEMSSVFKLGILCTATQPSSRPSMKDVLQILQRCNTHQSSADKKITAERR 788
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1865398 1867843 + Bma000379.1 Bma01g00209 74726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00209 788 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 1 782 - -
Bma01g00209 788 Pfam Leucine Rich repeat 328 344 IPR001611 GO:0005515
Bma01g00209 788 SUPERFAMILY L domain-like 11 252 - -
Bma01g00209 788 SUPERFAMILY Protein kinase-like (PK-like) 482 771 IPR011009 -
Bma01g00209 788 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Bma01g00209 788 Gene3D Ribonuclease Inhibitor 190 430 IPR032675 -
Bma01g00209 788 SMART serkin_6 493 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00209 788 Gene3D Phosphorylase Kinase; domain 1 471 572 - -
Bma01g00209 788 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 1 782 - -
Bma01g00209 788 Pfam Protein kinase domain 494 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00209 788 Pfam Leucine Rich Repeat 94 114 IPR001611 GO:0005515
Bma01g00209 788 Pfam Leucine Rich Repeat 46 64 IPR001611 GO:0005515
Bma01g00209 788 ProSiteProfiles Leucine-rich repeat profile. 330 352 IPR001611 GO:0005515
Bma01g00209 788 SMART LRR_typ_2 163 186 IPR003591 -
Bma01g00209 788 SMART LRR_typ_2 352 376 IPR003591 -
Bma01g00209 788 SMART LRR_typ_2 43 67 IPR003591 -
Bma01g00209 788 SMART LRR_typ_2 328 351 IPR003591 -
Bma01g00209 788 SMART LRR_typ_2 138 162 IPR003591 -
Bma01g00209 788 Pfam Leucine rich repeat 259 317 IPR001611 GO:0005515
Bma01g00209 788 Gene3D Transferase(Phosphotransferase) domain 1 573 787 - -
Bma01g00209 788 ProSitePatterns Protein kinases ATP-binding region signature. 499 522 IPR017441 GO:0005524
Bma01g00209 788 SUPERFAMILY L domain-like 193 395 - -
Bma01g00209 788 PRINTS Leucine-rich repeat signature 328 341 - -
Bma01g00209 788 PRINTS Leucine-rich repeat signature 93 106 - -
Bma01g00209 788 ProSiteProfiles Protein kinase domain profile. 493 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00209 788 Gene3D Ribonuclease Inhibitor 1 88 IPR032675 -
Bma01g00209 788 Gene3D Ribonuclease Inhibitor 89 188 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00209 Bma-Chr1:1865398 Bma07g00406 Bma-Chr7:4940273 2.77E-15 dispersed
Bma01g00209 Bma-Chr1:1865398 Bma15g01096 Bma-Chr15:43629790 3.22E-26 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66245 PF00069 Pkinase 3.40E-49 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00209 - - zju:107435719 981.859