Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00211 ATGAAGACGAAAACTCCATTGAAGCAGCTCAAGCTCTCTGTTCCCGTCCAAGAAACGCCGATCACCTCCTTCTTGACTGCAAGTGGCACCTTTCACGATGGAGATCTATTATTAAACCAGAAAGGCCTGCGGCTTATCTCTGAAGAAAAGGAATCTCGTATTTTTTTTTCTATGTTTCAACAGCAATCGGACAGCAAGGAGCTTGATTGTGATTTCTCACTAGAAGACCTCGAGACTATGAATGTCATCGGAAAAGGAAGTGGTGGTGTTGTACAACTTGTTCGTCATAAATGGCTAGGAAAACTATTTGCTTTAAAGGTTGTCATCCAGATGAACATACAAGAAAATATACGAAAACAAATAGTGCAAGAGTTGAAAATAAATCAAACAGCCCAGTGTCCACAGGTGGTGGTGTGCTACCACTCATTCTACCACAATGGGGCTATTTCTCTTGTCCTAGAATACATGGATCGCGGATCTTTGGCAGATGTGATTCGACAAGTTAAAACAATTCTTGAACCATATCTGGCTGTTGTATGTAAACAGAGTTTGAAGTTAAATGAATTCCTTTTAATTTTTCTTACATTTCAGGTGTTACTGGGTCTTGTGTACTTGCATCATGAACGGCATGTCATACATAGGGACATAAAGCCATCCAATCTGCTAGTGAACCACAAAGGGGAGGTGAAAATTACTGATTTTGGTGTTAGTGCTGTGCTAGCTAGCTCTATGGGTCAGAGAGATACTTTTGTAGGAACTTACAACTACATGGCGCCAGAGAGAATTAGTGGGAGTACCTACGACTGCAGTAGCGATATTTGGAGCTTAGGCATGGTGGTACTTGAGTGTGCTATAGGACGGTTTCCCTACACGCAATCTGAAGATCAGAAGAGTTGGCCTAGCTTTTATGAGCTTTTAACAGCAATTGTGTCAAGCCCGCCTCCCTCTGCTCCACCAGATCAGTTCTCTCCAGAATTTTGTTCATTTATATCTGCATGCATTCAAAAGGACCTGCAAAGGAGATCATCATCTTTGGACCTCTTGGGTCATCCTTTCATCAAAAAGTTTGAAAACAAAGACATTGATCTGGGAATACTTGTTGGCAGCTTGGAACCGCCTTTAAATTTCTCCAGGTAA 1137 41.69 MKTKTPLKQLKLSVPVQETPITSFLTASGTFHDGDLLLNQKGLRLISEEKESRIFFSMFQQQSDSKELDCDFSLEDLETMNVIGKGSGGVVQLVRHKWLGKLFALKVVIQMNIQENIRKQIVQELKINQTAQCPQVVVCYHSFYHNGAISLVLEYMDRGSLADVIRQVKTILEPYLAVVCKQSLKLNEFLLIFLTFQVLLGLVYLHHERHVIHRDIKPSNLLVNHKGEVKITDFGVSAVLASSMGQRDTFVGTYNYMAPERISGSTYDCSSDIWSLGMVVLECAIGRFPYTQSEDQKSWPSFYELLTAIVSSPPPSAPPDQFSPEFCSFISACIQKDLQRRSSSLDLLGHPFIKKFENKDIDLGILVGSLEPPLNFSR 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1878817 1881966 - Bma000381.1 Bma01g00211 74728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00211 378 SMART serkin_6 77 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00211 378 Pfam Protein kinase domain 78 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00211 378 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1 377 - -
Bma01g00211 378 CDD PKc_MAPKK_plant_like 75 358 - -
Bma01g00211 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Bma01g00211 378 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Bma01g00211 378 Gene3D Transferase(Phosphotransferase) domain 1 175 367 - -
Bma01g00211 378 Gene3D Phosphorylase Kinase; domain 1 44 157 - -
Bma01g00211 378 PIRSF ILK 5 348 - -
Bma01g00211 378 SUPERFAMILY Protein kinase-like (PK-like) 75 361 IPR011009 -
Bma01g00211 378 ProSiteProfiles Protein kinase domain profile. 77 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00211 378 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 6 1 377 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00211 Bma-Chr1:1878817 Bma06g00881 Bma-Chr6:43614687 3.69E-131 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66246 PF00069 Pkinase 4.30E-62 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00211 K04368 - qsu:111995051 611.683