Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00214 ATGAAGATCGAGTATTTGGAGGACCAGGCGTCTGACGGGGACGATGAAGTTTTTGATACTCAAATTGCCAAGGCTGATGCTAAGAGAGCTTTAGTTGGAGCGGGGGCGAGGATCTTGTTTTATCCGACTCTTTTGTATAATGTGGTTCGGAATAAGATTGAATCTGAATTCAGATGGTGGGATGAAGTTGATCAGTTTCTTCTTTTAGGTGCTGTTCCCTTTCCTAAAGATGTTCCTCGGCTGAAGCAGCTCGGTGTTGGTGGCGTCATCACTCTGAACGAATCTTATGAAACTCTCGTTCCATCATCCTTGTATCATAGCCATGGCATTGACCATTTAACGATTCCGACAAGAGATTATTGTTTTGCTCCTAAATTTGCAGATATAAGCCGAGCAGTTGACTTTATTCATAAAAATGCATCTTGTGGGAAAACTACATACGTTCATTGCAAAGCAGGAAGAGGGAGGAGCACGACTATTGTCCTCTGCTATTTGGTTAAATATAAAGACATGACACCTGTCGGGGCCTTAGATTATGTTCGATCGAGGAGGCCCCGCGTTTTGTTGGCACCCTCGCAATGGGAGCAGGCAGTTCAAGAATATAGCAATCGCCTCCCCCCAACAGGTGCATACTCTCCCTCGAGAGATGCAGTTCTTGTCACAAAAGCCGACCTCGACGGCTATTATGCAAACGGCACTGACGTTTCTGGTAAAGAGTTGGCACTTGTCCCTAAAGTGGCAAAAACTAAGCCAATGATAGCCAAGCTGTCTTGTCTTTTTGCATCCTTGAAAGTTAATGGGAGCGGCTCAGTCCCAAGACGGATGCCTGTGCCGGAAGCTCGAGCTTGCTGA 852 46.01 MKIEYLEDQASDGDDEVFDTQIAKADAKRALVGAGARILFYPTLLYNVVRNKIESEFRWWDEVDQFLLLGAVPFPKDVPRLKQLGVGGVITLNESYETLVPSSLYHSHGIDHLTIPTRDYCFAPKFADISRAVDFIHKNASCGKTTYVHCKAGRGRSTTIVLCYLVKYKDMTPVGALDYVRSRRPRVLLAPSQWEQAVQEYSNRLPPTGAYSPSRDAVLVTKADLDGYYANGTDVSGKELALVPKVAKTKPMIAKLSCLFASLKVNGSGSVPRRMPVPEARAC 283
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1903063 1905116 + Bma000384.1 Bma01g00214 74731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00214 283 ProSitePatterns Tyrosine specific protein phosphatases active site. 148 158 IPR016130 GO:0016311|GO:0016791
Bma01g00214 283 Gene3D Protein tyrosine phosphatase superfamily 59 206 IPR029021 -
Bma01g00214 283 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 127 195 IPR000387 GO:0016311|GO:0016791
Bma01g00214 283 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 52 199 IPR029021 -
Bma01g00214 283 SMART dsp_5 62 204 IPR020422 GO:0006470|GO:0008138
Bma01g00214 283 CDD PTPMT1 59 204 IPR044596 GO:0004721
Bma01g00214 283 Pfam Dual specificity phosphatase, catalytic domain 80 198 IPR000340 GO:0008138|GO:0016311
Bma01g00214 283 PANTHER OS01G0739200 PROTEIN 14 283 - -
Bma01g00214 283 ProSiteProfiles Dual specificity protein phosphatase domain profile. 59 206 IPR020422 GO:0006470|GO:0008138
Bma01g00214 283 PANTHER - 14 283 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00214 Bma-Chr1:1903063 Bma14g00635 Bma-Chr14:6821482 1.91E-99 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00214 - - mnt:21390393 443.351