Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00262 ATGGCCAGGGTCTTCTGGATTGTCGCTCTTTCGCTTTTTCTGCCATTAGTTGTGGCTAAGAAAACTTACATTGTGCAGACAGAGCACAATTCGAAGCCATCTTCGTTCAAAACCCACCATGACTGGTACTCTGCTCACCTTATGTCCATTTCCTCATCCTCCGATTCACTGCTTTACACATACAGTACAGCCTACCATGGTTTTGCTGCTGCGCTAGAACCCCAAGAAGCAGAAGCCCTCCGAAAGACTCGTTCAGTTCTGGGTGTCTTCGAAGACACCGTTTACACCCTCCACACCACTCGTACCCCTGAATTTCTCGGCCTAGACACGAACTTTGGATTCTCTGAAGGTCACAATAATGGAGAATTTGATAAATATTATGATGTTATCATTGGAGTTCTCGATACAGGGGTCTGGCCGGAGTCAAAGAGCTTTGACGATTCAGGAATAGAAGACATTCCGGCCCGGTGGCGAGGGGAGTGCGAATTGGCACCTGATTTTAACCGTTCCCTCTGCAACAAGAAGCTAATTGGAGCCCGGAGCTTTTCAAGGGGCTACAGAATAGCGTCTGGCGGAGGTTTTACGAAAAAACATGGAGAGATATATTCACCTCGAGACAGAGATGGCCATGGGACACATACGGCTAGCACTGCGGCGGGTTCGCTTGTGGCGAACGCGAGCTTACGAGGATATGCGAGGGGGACTGCTCGTGGGATGGCGACAATGGCTCGTCTTTCTATTTATAAGGTGTGTTGGCCCAACGGATGTTTTGGTTCTGATATTCTCGCTGGAATAGAAAGAGCCATCGTAGACGGCGTTGATATTCTCTCGCTCTCGTTAGGAGGAGGTGGGTCTGCGCCATACTACCAAGACACCATAGCCATCGGAGCATTCTCGGCTATGGAGAGAGGTATTTTCGTCTCCTGCTCCGCCGGAAACAGTGGGCCAAGTAGAGCGTCGTTGGCCAATGTCGCGCCGTGGATCATGACAGTCGGGGCGGGTACATTGGACCGGGACTTTCCGGCTTATGTTCATCTTGGAAACCATCTCCGGTTCACCGGCGTTTCGCTATACAGTGGGAAATTGATGGGGGTTGAACCGGGGGAACTTTTTTACGGTTCGAGTTCTAACAACGGCTCGAGCAACATGTGCTTTCCCGGTTCGCTTGAACCGAGAAAGGTCCGCGGTAAGGTAGTGGTTTGTGACAGGGGGATAAACGCACGAGTGGAAAAGGGTAGGGTTGTGCGGGACGCCGGAGGAGTGGGGATGATACTGGCGAACACAGCGTTGAACGGTGAGGAATTAGTGGCGGACAGCCACTTACTACCGGCTGTTGCCGTGGGGAGGAAAGTGGGGAATCGAATCAGAAAGTATGCGCTCTCTGGTCTCAAACCCACGGCAGTTCTGAGCTTTGGGGGGACGGTATTGAATGTCCGTCCGTCGCCAGTTGTGGCGGCATTTAGTTCGAGAGGGCCAAACACGGTAACCCCACAAATCCTCAAACCGGATGTGATCGGTCCTGGGGTCAATATCTTAGCTGCATGGTCCGAGGCGATCGGCCCCAGTGGTCTCGCCGGAGATCTGAGGAAGACTCTCTTCAACATAATGTCAGGTACTTCAATGTCATGTCCACACATCAGCGGTTTAGCGGCGTTACTCAAAGGGGCTCACCCAGATTGGAGTCCAAGCGCCATTAAATCGGCGCTGATGACGACCGCCTACACCAGAGACAACACCGGTCACCATCTCCGGGACGCAGCAGCCGGAGCTTCCCATTCCAACCCATTTGCTCACGGGTCTGGTCACGTAGACCCGCACAAAGCCTTCTCTCCCGGCCTCGTCTACGACATTTCCCCCCGCGACTACACCGTCTTCCTCTGCTCCTTAAACTACTCCTCCAACCAGCTTCGCCTCATCGTGAAACGCTCCAACATTTCCTGCTCCCGCAAATTCTCTGATCCCGGCCAGCTCAATTACCCATCGTTTTCTGTCGTGTTCGGGGCACAGAGGGTCTTCAGATACACCCGAGTAGTGAAAAATGTCGGGGAGGCAAGTACGCTCTACGAGGTGGCCGTTGAAGCTCCGGCGACGGTGAGCGTTACAGTGCATCCGGCGAAGCTTGCATTTAGTAAAGTGGGCGAGAAGAAGAGTTACACAGTAACGTTTGTGGCGGCGGCGGCGAGCTACGGCGGCGAGAGATTCCGTTACGGGTCAATCGAGTGGAGCAATGGGCACCACAAAGTCAGGAGCCCCATCGCGTTTTCATGGAGACGCCATTAA 2280 53.2 MARVFWIVALSLFLPLVVAKKTYIVQTEHNSKPSSFKTHHDWYSAHLMSISSSSDSLLYTYSTAYHGFAAALEPQEAEALRKTRSVLGVFEDTVYTLHTTRTPEFLGLDTNFGFSEGHNNGEFDKYYDVIIGVLDTGVWPESKSFDDSGIEDIPARWRGECELAPDFNRSLCNKKLIGARSFSRGYRIASGGGFTKKHGEIYSPRDRDGHGTHTASTAAGSLVANASLRGYARGTARGMATMARLSIYKVCWPNGCFGSDILAGIERAIVDGVDILSLSLGGGGSAPYYQDTIAIGAFSAMERGIFVSCSAGNSGPSRASLANVAPWIMTVGAGTLDRDFPAYVHLGNHLRFTGVSLYSGKLMGVEPGELFYGSSSNNGSSNMCFPGSLEPRKVRGKVVVCDRGINARVEKGRVVRDAGGVGMILANTALNGEELVADSHLLPAVAVGRKVGNRIRKYALSGLKPTAVLSFGGTVLNVRPSPVVAAFSSRGPNTVTPQILKPDVIGPGVNILAAWSEAIGPSGLAGDLRKTLFNIMSGTSMSCPHISGLAALLKGAHPDWSPSAIKSALMTTAYTRDNTGHHLRDAAAGASHSNPFAHGSGHVDPHKAFSPGLVYDISPRDYTVFLCSLNYSSNQLRLIVKRSNISCSRKFSDPGQLNYPSFSVVFGAQRVFRYTRVVKNVGEASTLYEVAVEAPATVSVTVHPAKLAFSKVGEKKSYTVTFVAAAASYGGERFRYGSIEWSNGHHKVRSPIAFSWRRH 759
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2206754 2209033 + Bma000428.1 Bma01g00262 74779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00262 759 ProSiteProfiles Serine proteases, subtilase domain profile. 94 609 - -
Bma01g00262 759 Gene3D - 337 476 - -
Bma01g00262 759 SUPERFAMILY Protease propeptides/inhibitors 21 97 - -
Bma01g00262 759 SUPERFAMILY Subtilisin-like 97 613 IPR036852 GO:0004252|GO:0006508
Bma01g00262 759 CDD PA_subtilisin_like 343 467 - -
Bma01g00262 759 Gene3D Peptidase S8/S53 domain 128 622 IPR036852 GO:0004252|GO:0006508
Bma01g00262 759 Pfam Fibronectin type-III domain 656 753 IPR041469 -
Bma01g00262 759 Pfam PA domain 369 455 IPR003137 -
Bma01g00262 759 Pfam Peptidase inhibitor I9 22 98 IPR010259 -
Bma01g00262 759 ProSitePatterns Serine proteases, subtilase family, serine active site. 538 548 IPR023828 -
Bma01g00262 759 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 13 756 IPR045051 -
Bma01g00262 759 CDD Peptidases_S8_3 95 574 IPR034197 -
Bma01g00262 759 PRINTS Subtilisin serine protease family (S8) signature 126 145 IPR015500 -
Bma01g00262 759 PRINTS Subtilisin serine protease family (S8) signature 206 219 IPR015500 -
Bma01g00262 759 PRINTS Subtilisin serine protease family (S8) signature 537 553 IPR015500 -
Bma01g00262 759 PANTHER - 13 756 - -
Bma01g00262 759 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 98 IPR037045 -
Bma01g00262 759 Pfam Subtilase family 128 577 IPR000209 GO:0006508|GO:0008236
Bma01g00262 759 Gene3D - 626 756 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00262 Bma-Chr1:2206754 Bma03g01131 Bma-Chr3:14970853 0 dispersed
Bma01g00262 Bma-Chr1:2206754 Bma11g00613 Bma-Chr11:9271603 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00262 - - csv:101209781 1082.01