Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma01g00269 | ATATCGATAGTTGGCTATTTGTCCTCGAATATATTACTGATGTTTTATTTTGTACGATATGAACTATATGACAAGGAAGGTTTATTGGCATCTGATATAGGCCTCAAGCAAAGCCGGCAACCTGCTGAGTTCTTCTGTAAAACTCTTACAGCTAGTGACACGAGCACTCATGGTGGATTTTCTGTACCTCGTCGAGCGGCTGACAAGATCTTTCCACCACTAGATTACTCGATGCAACCCCCTGCTCAGGAGCTTGTCGCTAGAGATCTACACGAAACTTCATGGACATTCAAGCATATTTACCGAGGCCAACCTAAAAGACATCTGCTGACTACTGGCTGGAGTGTTTTTGTTAGTACGAAACGTCTTTTTGCCGGAGATTCAGTTCTTTTCATAAGGTATCAAGCTGTTTTTTTACTAAAATTTTTCCGGGACTTACCAATAATTATCCGTTTGATATGTTTTTCTAGAGATGAAAAATCACAGTTTCTCCTAGGCATACGGCGGGCTAATAGGCAGCAGCCAGCTCTCTCTTCTTCTGTGATTTCTAGCGATAGCATGCACATTGGAATTCTTGCTTCTGCAGCTCATGCTGCATCAAATAATAGTCCGTTCACTATATTTTATAATCCTAGGGCAAGTCCTTCTGAATTTGTAATTCCCTTGGCCAAATACAATAAAGCAATGTACACCCAAGTTTCCCTTGGCATGCGATTTCGAATGATGTATGAGACGGAGGAGTTAGGGGTGCGTAGATATATGGGTACAATAACTGGTATTAGCGACTTGGATTCATTGCGATGGAAAAGCTCACAATGGCGTAATCTTCAGGTTGGATGGGACGAATCAGCAGCTGGTGAAAGGCCCAGCCGAGTCTCCATCTGGGAAGTCGAGCCAGTCATAACTCCTTTTTACATATGCCCGCCTCCATTTTTTAGACCCAAACAGCCAGGAATGCCAGATGATGAATCCGAAATCGAAAACGCTTTCAAACGAGCTATGCCATGGCTTGGAGATGATTTTAGCATGAAGGACACTCAGAGCCCGATCTTTCCCGGTCTAAGTCTAGTGCAGTGGATGAATATGCAGCAAAATAATCAATTTCCGTCAGCCCAAGCTGGATTTTTACCGTCTATGGTCTCTCCAAACGCCCATTCCCTGCATAATAATTTAACCACTGATGATCCATCTAAATTACTGAGTTTCCAAACTCCATTACTATCTTCACCTACTCCTCCCTATAATAAATCTAATCAGCAAGGCCAAGTTAGCCAATTGCAGCAGCCATCCTCTGCGTGGCCCCAACAGCATCAACCTCAGCCTCTTTCTCAGGCAAAGCCATTATTGCAGATTCCAACCAGCCAACAGCTACATCGGCAGCAGCCACAGCACCAACAAAACAAGCAAATTCTACCTCAACAACAGCTTTGCCAACCACCTCCTTCAAATAATAATGGTTTTGTTGGTAACCAGATGCAGAATCAAAATTTGGAGCAACTGGTGGTGTCCTCTCAGCTTCAGCAGCAAGAGTTTCTGGCGGGCAATGGACAAACCCAGCAAAACATGAATAGATCATTTCAGATGACATCCTTACCACAAGATTCCATTTTTCAGCAACAAATGGAACAGCAAGTCAACCTCGTTCCTAGGAATCAGCAACAACCTGGCCTTTCACAAAGAGCATCTCAGACTCAACCAGTTCAACAGTTGCCTCAACAATCGCCATTAGACCACCAACTTCAGATGCAGATGCTCCAGAAATTACAGCAGCAGCAACAGCAGTTGCTCTTTCCAGCAAACCCATTATTACAGTCTCAGCCAGTACAGCTTCTGCAGAGCCATCATCAGAACCACCCACTACAAAACACCAATGCCTTTTCAACTTCAGGCCTTCTGCAGTCTCAACATATTCCCACGCCCCAGCCCCAGTACCAGCCCAAGGGTGGTCAATTCAAGCCTCTCCATGGCATCAGAGCTCAGTCTATGACGGATGGTGATGCCCCATCTTGCTCAACTTCACCTTCCACCAATAATTGCCATGTTTCAACATCAAACATTTTGAACAGAAAGCAAGGGCCAGTCACTCTAGCAGAATGTTCAGTAGTTGAGCCTTCAAACAGTCTACTTCAGGAACTTCAAAGCAAATATGATAGCCGAATCAAACATGAATTTCCATGTGAGAAAGGACCAGATCTAATCAAATACAAGAACCCAATCACTGAGCAGTTAGAAGCATCCTCTTCTGGAACATCATACTGCCTAGATGCTGGCCCAACACAGCAGCCTATTCCACTCCCTGTCTGTTTAGACAACGATGTCCATTCCCATCATCGGATGAACATTCCTTTCACGAGTAACATTGATGGGTTGATGCCGGATTCTTTATTGTCGAGACAATATGACTCTCAAAACTTACTTTCTAACTACACTAGCCTTCCAAGAGATATTGAGACAGAGTTGTCTAGTGCGCCTATCAGCCCACAGCCATTTGGAGTGCCAAACATGCCTCTTAAGCCAGGCTGCTCAAATGACGTCCCGATAAATGATTCGGGAGCCATGGGCGGCGGGTTGTGGGCAAATCACAGTCAACGCATGCGTACCTATACAAAGGTTCAAAAGCGCGGATCTGTAGGAAGATGTATTGATGTGACCCGTTACCGAGGATATGGAGATTTAAGGTGTGATGTTGCCCGTATGTTTGGGATCGAAGGGCTGCTAGAAGACCCTCAAAGAACCGATTGGAAGCTTGTTTATGTAGATCACGAAAATGACATACTCCTTGTCGGAGATGATCCATGGGAAGAGTTTGTGAGCTGTGTTCAGAGCATAAAAATACTTTCGTCGGCTGAAGTACAGCAAATGAGTATGAACGGAGATTTGGGTCAAATTCAAATTCCGAATCAAGCGTGTAGTGGGACGGACAGTGGAAATGCTTGGAGAGACGACCACTCAGCAGCTTCCTTCAATAGATAG | 2973 | 44.6 | ISIVGYLSSNILLMFYFVRYELYDKEGLLASDIGLKQSRQPAEFFCKTLTASDTSTHGGFSVPRRAADKIFPPLDYSMQPPAQELVARDLHETSWTFKHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRYQAVFLLKFFRDLPIIIRLICFSRDEKSQFLLGIRRANRQQPALSSSVISSDSMHIGILASAAHAASNNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMYETEELGVRRYMGTITGISDLDSLRWKSSQWRNLQVGWDESAAGERPSRVSIWEVEPVITPFYICPPPFFRPKQPGMPDDESEIENAFKRAMPWLGDDFSMKDTQSPIFPGLSLVQWMNMQQNNQFPSAQAGFLPSMVSPNAHSLHNNLTTDDPSKLLSFQTPLLSSPTPPYNKSNQQGQVSQLQQPSSAWPQQHQPQPLSQAKPLLQIPTSQQLHRQQPQHQQNKQILPQQQLCQPPPSNNNGFVGNQMQNQNLEQLVVSSQLQQQEFLAGNGQTQQNMNRSFQMTSLPQDSIFQQQMEQQVNLVPRNQQQPGLSQRASQTQPVQQLPQQSPLDHQLQMQMLQKLQQQQQQLLFPANPLLQSQPVQLLQSHHQNHPLQNTNAFSTSGLLQSQHIPTPQPQYQPKGGQFKPLHGIRAQSMTDGDAPSCSTSPSTNNCHVSTSNILNRKQGPVTLAECSVVEPSNSLLQELQSKYDSRIKHEFPCEKGPDLIKYKNPITEQLEASSSGTSYCLDAGPTQQPIPLPVCLDNDVHSHHRMNIPFTSNIDGLMPDSLLSRQYDSQNLLSNYTSLPRDIETELSSAPISPQPFGVPNMPLKPGCSNDVPINDSGAMGGGLWANHSQRMRTYTKVQKRGSVGRCIDVTRYRGYGDLRCDVARMFGIEGLLEDPQRTDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSMNGDLGQIQIPNQACSGTDSGNAWRDDHSAASFNR | 990 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 2235875 | 2240521 | - | Bma000435.1 | Bma01g00269 | 74786 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma01g00269 | 990 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 154 | 980 | IPR044835 | GO:0003677|GO:0006355|GO:0009725 | |
Bma01g00269 | 990 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 23 | 134 | IPR044835 | GO:0003677|GO:0006355|GO:0009725 | |
Bma01g00269 | 990 | Gene3D | - | 861 | 955 | - | - | |
Bma01g00269 | 990 | Pfam | Auxin response factor | 195 | 277 | IPR010525 | GO:0003677|GO:0005634|GO:0006355|GO:0009725 | |
Bma01g00269 | 990 | SUPERFAMILY | CAD & PB1 domains | 879 | 944 | - | - | |
Bma01g00269 | 990 | MobiDBLite | consensus disorder prediction | 386 | 442 | - | - | |
Bma01g00269 | 990 | Gene3D | - | 43 | 170 | IPR015300 | - | |
Bma01g00269 | 990 | MobiDBLite | consensus disorder prediction | 454 | 490 | - | - | |
Bma01g00269 | 990 | MobiDBLite | consensus disorder prediction | 971 | 990 | - | - | |
Bma01g00269 | 990 | ProSiteProfiles | B3 DNA-binding domain profile. | 45 | 146 | IPR003340 | GO:0003677 | |
Bma01g00269 | 990 | Pfam | B3 DNA binding domain | 45 | 142 | IPR003340 | GO:0003677 | |
Bma01g00269 | 990 | SMART | B3_2 | 45 | 146 | IPR003340 | GO:0003677 | |
Bma01g00269 | 990 | PANTHER | AUXIN RESPONSE FACTOR 19 | 23 | 134 | - | - | |
Bma01g00269 | 990 | Pfam | AUX/IAA family | 911 | 953 | IPR033389 | - | |
Bma01g00269 | 990 | CDD | B3_DNA | 44 | 144 | IPR003340 | GO:0003677 | |
Bma01g00269 | 990 | Gene3D | - | 232 | 302 | - | - | |
Bma01g00269 | 990 | SUPERFAMILY | DNA-binding pseudobarrel domain | 35 | 136 | IPR015300 | - | |
Bma01g00269 | 990 | ProSiteProfiles | PB1 domain profile. | 866 | 950 | IPR000270 | GO:0005515 | |
Bma01g00269 | 990 | PANTHER | AUXIN RESPONSE FACTOR 19 | 154 | 980 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma01g00269 | Bma06g01012 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g00269 | Bma-Chr1:2235875 | Bma07g00655 | Bma-Chr7:10909727 | 0 | dispersed | |
Bma01g00269 | Bma-Chr1:2235875 | Bma06g01012 | Bma-Chr6:46669733 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56626 | PF02309 | AUX_IAA | 5.80E-08 | CL0072 | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma01g00269 | K14486 | - | zju:107406859 | 1229.54 |