Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma01g00275 | ATGGGAAAAGAAGTCCTTAACAAGAATCAACAGCTGCAGCTGCCACAGCAAACGTCGTACACGGTGGAGCAGATGATTGCCGTGAATCCCTACAACCCGGACATCCTTTCTGATCTCGAAAACTACGTTAACGAGCAGGTTGCATCTCAATCATACAGTCTGGACGCTAATCTATGCCTTCTTCGCCTATATCAGTTTGAGCCGGAGCGAATGAGTACCCAGATAGTTGCACGCATTCTTGTTAAGGCCTTGATGGCGATGCCAGCTCCTGATTTCAGTCTTTGCCTCTTTTTGATTCCTGAAAGAGTGCAAATGGAAGAGCAGTTCAAGATTCTGATTGTTCTTTCACACTACTTGGAGACTGGACGGTTTCAACAATTCTGGGATGAAGCTGCTAAGAGCCGGAATATATTGGAAGCTGTGCCAGGTTTCGAGCAAGCCATCCAAGCCTATGCAATTCACGTACTTTCCTTGACCTATCAAAAGATCCCTAGGCCTGTACTGGCTGAGGCGATGAATATCGAGGGTCTATCTTTAGACAAATTCCTCGAGCACCAGGTGGCAAACTGTGGTTGGAATCTCGGAAAAGGTCAAGGGAAGAGCCAACTTATTATCTTACCCCGCAACGAATACAACCATCCTGAACTGAAGAACTCTGAAGATAACATCCAATTAGAACTCGTCACCCGAATTTTCCCAATTCTCGGCTGA | 711 | 46.13 | MGKEVLNKNQQLQLPQQTSYTVEQMIAVNPYNPDILSDLENYVNEQVASQSYSLDANLCLLRLYQFEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKILIVLSHYLETGRFQQFWDEAAKSRNILEAVPGFEQAIQAYAIHVLSLTYQKIPRPVLAEAMNIEGLSLDKFLEHQVANCGWNLGKGQGKSQLIILPRNEYNHPELKNSEDNIQLELVTRIFPILG | 236 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 2293456 | 2295513 | + | Bma000442.1 | Bma01g00275 | 74792 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma01g00275 | 236 | Gene3D | - | 133 | 234 | IPR036388 | - | |
Bma01g00275 | 236 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 | 16 | 236 | IPR009374 | GO:0003743|GO:0005737|GO:0005852 | |
Bma01g00275 | 236 | SUPERFAMILY | ARM repeat | 15 | 140 | IPR016024 | - | |
Bma01g00275 | 236 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT K | 16 | 236 | - | - | |
Bma01g00275 | 236 | Pfam | CSN8/PSMD8/EIF3K family | 72 | 199 | IPR033464 | - | |
Bma01g00275 | 236 | Gene3D | ARM repeat; domain 1 | 13 | 130 | IPR016020 | GO:0003743|GO:0005852|GO:0006446|GO:0043022 | |
Bma01g00275 | 236 | ProSiteProfiles | PCI domain profile. | 52 | 211 | IPR000717 | - | |
Bma01g00275 | 236 | SUPERFAMILY | Winged helix DNA-binding domain | 142 | 233 | IPR036390 | - | |
Bma01g00275 | 236 | Hamap | Eukaryotic translation initiation factor 3 subunit K [EIF3K]. | 13 | 236 | IPR009374 | GO:0003743|GO:0005737|GO:0005852 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma01g00275 | K15028 | - | qsu:112019837 | 395.586 |