Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00315 ATGGAGAAGAAATGTGGATGTTGGGCTGTTCTCAAACGCGGTGCTAAAGGAAACTGCAAGTCCTCTGCCTCTAAAGATTCTGCTAACGTGATCCCTCGCAGCAGCCTGGTTTACGATACTGCGACGGAGACACGATACCTTAATGCAAGCAATCGAGCACTCTGCTCCTCAATTGAAGCTCACCTATCATCTGATAATCCCAACTCATCTCCACCAGAGAACAAATCTACATGCCATTTGCTTCAATTTTCTTTTCAGGAGTTAAAATCTGCAACAGGAAATTTCAGACCAGATAGTATAGTTGGGGAGGGAGGATTTGGATATGTCTTCAAAGGATGGATCGAGGAGAACGGGACGGCACCTGCAAAACCAGGATCGGGAATTACTGTTGCCGTTAAGAGCTTGAAGCCAGATGGTCTTCAAGGCCACAGAGAGTGGATGGCTGAAGTTGACTTTCTTGGTCAGCTCCATCATCCTAATCTCGTTAAGCTTATTGGCTACTGCATCGAAGATGATCAACGATTGCTCGTATATGAATTTATGACGCGTGGAAGTCTTGAAAATCATCTTTTCAGGCGGACTGTACCTCTTCCATGGTGCGTGAGGCTTAAGATTGCGCTCGGTGCAGCCAAAGGACTTGCCTTTCTCCATTACGCTCCGGAACCCGTCATTTACAGAGATTTTAAGACTTCCAATATTTTGCTTGATTCAGAATACAACGCCAAGCTTTCGGATTTTGGTTTGGCAAAAGCCGGTCCTCGTGAAGGCAAAACACATGTTTCTACTCGAGTCGTTGGAACTTACGGCTATGCCGCACCCGAATATGTCATGACAGGACATCTAACATCGAAGAGCGACGTCTATAGTTTCGGCGTAGTTCTTCTCGAGATTTTGACCGGCCGAAGATCGATGGACAAAAAAAGACCAAGTGGTGAGCAGAATCTAGTGACTTGGGCTCGACCATATCTCTCTGACAAAAAACGACTTTACCAAATCATCGATCCTCGGTTAGAGCTTAACTACTCCATTAAAGGCGTTCAAAAGATCTCTCAACTTGCTTCCAGCTGCCTCAACCGAGACCTGAAATGTCGTCCGACAATGGATGAAGTCGTAAAGATTCTCTCGTTATTACAAGGTCTTAACGACCTGGCCGTTTTGTTGTACCATTCTCGGATATCTCAGCAAGGGCGGAGGAAGAAGAAAGCGGATTCTACCCCACAGCTTACGTATTTCAATACGAAAAGCATCAGAGCTTCTCCGCTGAATACTAGGAAGCATTAA 1281 45.59 MEKKCGCWAVLKRGAKGNCKSSASKDSANVIPRSSLVYDTATETRYLNASNRALCSSIEAHLSSDNPNSSPPENKSTCHLLQFSFQELKSATGNFRPDSIVGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWMAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTVPLPWCVRLKIALGAAKGLAFLHYAPEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPREGKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVTWARPYLSDKKRLYQIIDPRLELNYSIKGVQKISQLASSCLNRDLKCRPTMDEVVKILSLLQGLNDLAVLLYHSRISQQGRRKKKADSTPQLTYFNTKSIRASPLNTRKH 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2583860 2586787 - Bma000482.1 Bma01g00315 74832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00315 426 PANTHER OS01G0588500 PROTEIN 56 394 - -
Bma01g00315 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Bma01g00315 426 PANTHER OS01G0588500 PROTEIN-RELATED 56 394 - -
Bma01g00315 426 Pfam Protein tyrosine and serine/threonine kinase 100 374 IPR001245 GO:0004672|GO:0006468
Bma01g00315 426 ProSiteProfiles Protein kinase domain profile. 95 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00315 426 CDD STKc_IRAK 101 377 - -
Bma01g00315 426 Gene3D Phosphorylase Kinase; domain 1 71 180 - -
Bma01g00315 426 ProSitePatterns Protein kinases ATP-binding region signature. 101 133 IPR017441 GO:0005524
Bma01g00315 426 SUPERFAMILY Protein kinase-like (PK-like) 77 382 IPR011009 -
Bma01g00315 426 Gene3D Transferase(Phosphotransferase) domain 1 181 385 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00315 Bma-Chr1:2583860 Bma06g00669 Bma-Chr6:35919201 1.39E-174 dispersed
Bma01g00315 Bma-Chr1:2583860 Bma04g01242 Bma-Chr4:36845565 1.40E-148 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66249 PF07714 PK_Tyr_Ser-Thr 1.90E-47 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00315 - - qsu:111988517 729.554