Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00323 ATGTTGATTCTGAAAGAAGGGACTAGGCCACCATGGGTGGGATTGGGAGCTTCAGTTTGGGTGCAAATAGCTGCTGGAAATGCGTATAACTTTCCACTGTATTCTCACTCTTTGAAATCGGTTCTGGGTTTTAATCAACTCCAGCTTACTTTGCTTGGAGTGGCAAATGATATTGGTGAGAACGTGGGTATTCTTCCTGGGTTAGTTTCCAATAAGCTTCCTCCATGGATGGTGCTTTTGATTGGTGCTCTGGCCTGCTTCTTCGGCTATGGTGTGATTTGGCTTTCGTTAAGCCGAACAGTTCAATCTTTGCCTTTTTGGTTGTTATGGGTTGCACTTAGTGTTGCAACCAATAGTAGTGCCTGGTTTACCACTGCTGTGCTCGTAACCAATATGAGAAACTTCCCTCTCAGTCGAGGAATGGTTGCGGCTATTCTCAAAGGCTATGGCGGGCTCAGTGGTGCAGTTTTTACTGAGATCTTCAGCATAATTCTTCAGAACTCCTCTGCAAATCTTTTGTTGTTCCTTGCACTTGGAGTTCCGCTTCTCTGTATCAGCATGATGTACTTTGTGAGACCTTGTACTCCAGCTTCCGGCGAAGACCCATCAGAAAAAGGACGTTTTCATTTCGCTCTAGCTGCTAGTGTCGTTCTTGGAATTTTTCTTCTCACGACCACAATTTTAAATGACATTCTTCATTTAAACACTCTTATTTCCTATGTTTTTGTCGGTGTAATGGTTCTGCTTCTCATGGCTCCCCTTACGATCCCTGTAAAGATGACATGGTGTCGTATGCCAGTCGGCACAGAGGAGAAAATTGTCCAGTCAGCTGAGTCTTTGGAGACTCAGATTCAAGAAAGTAATGGAGGTGAATTGGAAGAACAGCTATTGGTATCTTCATCCTCGAGAGTAAACTTGGAAGGCTATGCTGAAAGTGAAGATGTATCAGAGGTGGCAATGCTCCTAGCTGAAGGAGAGGGGGCAGTGAAGAAGAAGAGAAGGCCTAAGAGAGGGGAGGATTTTACGTTTACTGAAGCTATTGTCAAGGCTGATTTTTGGCTTCTATTCTTGGTTAACTTTGTCAGTGTAGGCACCGGAGTCACTGCACTTAATAACCTGGCTCAAATTGGGATTGCTCAAGGTGCAAATGATACTACAAGCTTGCTGTCTCTTTTCAGCTTCTGCAATTTTGTGGGCCGTCTTAGTGGTGGCGTTGTCTCGGAACACTTTGTCAGGACAAGAACAGTTCCTCGCACAATTTGGATGACACTGACACTGCTAGTAATGATCGTTACCTATCTTTTATTTGCTTCTGCTATTGATGGTACTCTCTATCCGGCTACTGCTTTACTTGGGATCTGCTATGGTACTCAAATCTCAGTAATGGTTGCAACTGTCTCAGAAATTTTTGGGTTAAAACATTTTGGAGTACTCTACAATGTTATGTCATTAGGGAATCCTCTTGGTGCTTGTCTTTTCTCTGTCCTCCTAGCTGGGTACATTTATGATAATGAAGCATCAAAGCAGCATAGACTCGACCCAACGGGCTCTAATTTATCTTGCTTAGGCGCTAATTGTTTTAGAGTCACCTTCGAGGTTCTAGCTGGCGTTTGTGCTGTCGGTTGTATCTTGAGCATTATTTTAACTAGACGAATAAGGCCAGTCTACCAAATGCTTTACTCTGGTGGTTCTTTTCGGCTGCCTCAGACTTCAAGTCGTTAA 1722 43.67 MLILKEGTRPPWVGLGASVWVQIAAGNAYNFPLYSHSLKSVLGFNQLQLTLLGVANDIGENVGILPGLVSNKLPPWMVLLIGALACFFGYGVIWLSLSRTVQSLPFWLLWVALSVATNSSAWFTTAVLVTNMRNFPLSRGMVAAILKGYGGLSGAVFTEIFSIILQNSSANLLLFLALGVPLLCISMMYFVRPCTPASGEDPSEKGRFHFALAASVVLGIFLLTTTILNDILHLNTLISYVFVGVMVLLLMAPLTIPVKMTWCRMPVGTEEKIVQSAESLETQIQESNGGELEEQLLVSSSSRVNLEGYAESEDVSEVAMLLAEGEGAVKKKRRPKRGEDFTFTEAIVKADFWLLFLVNFVSVGTGVTALNNLAQIGIAQGANDTTSLLSLFSFCNFVGRLSGGVVSEHFVRTRTVPRTIWMTLTLLVMIVTYLLFASAIDGTLYPATALLGICYGTQISVMVATVSEIFGLKHFGVLYNVMSLGNPLGACLFSVLLAGYIYDNEASKQHRLDPTGSNLSCLGANCFRVTFEVLAGVCAVGCILSIILTRRIRPVYQMLYSGGSFRLPQTSSR 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2668100 2671091 + Bma000491.1 Bma01g00323 74840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00323 573 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 572 - -
Bma01g00323 573 SUPERFAMILY MFS general substrate transporter 12 195 IPR036259 -
Bma01g00323 573 Pfam Nodulin-like 11 258 IPR010658 -
Bma01g00323 573 SUPERFAMILY MFS general substrate transporter 213 554 IPR036259 -
Bma01g00323 573 Pfam Major Facilitator Superfamily 377 551 IPR011701 GO:0022857|GO:0055085
Bma01g00323 573 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 2 572 - -
Bma01g00323 573 CDD MFS_Mch1p_like 10 542 - -
Bma01g00323 573 Gene3D MFS general substrate transporter like domains 349 554 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00323 Bma-Chr1:2668100 Bma13g00691 Bma-Chr13:19159163 0 dispersed
Bma01g00323 Bma-Chr1:2668100 Bma11g00195 Bma-Chr11:1750042 5.48E-84 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00323 - - pvy:116105435 822.002