Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00353 ATGGTCAAATCATCTTCTGCAGCCTTCAACTTCCTCGTCTATAACGGAGCTGATGTGGGAATTGTAGCCGGTGGCCGAAAGGACGACGGCGAGGCAGCTTCGTGGCTTTTGATGAACCAGGGCTTCAACTCTAAGCTAATGGAGGGTGAGCAATTGAAGTCAGAAGATACGTTTTTGTCGGAAATGGATATGTTCAACGATTTCGAATATCCCAACCCAACCTCCGGTACTGACAGCGTCGTCCCGGTGCAGACTAAGCAAGTATTGGCGGCAGCGGCGATCAGTCACTCAAACGAAAACTGCTTCAATATCGATTTTTGCCGATCGAAACTCAACTCATTTACCTATCCATCTCAGGGACTAAGCCATAGCATTTCCTCATCGTCGCTGGATGTCGGAATCGTCCCAGACGGAAATTCGGGAAACTCGTTATCCGAGATTTCGTTTTCTTTCAGTGGAAACGTGGTTGAAGCAGGCGTATCGGGGTCAGCCACGGCGGAACAGGTGACGCCGCTGTGTGGGTTGGATCGGGAGGCGAAGGTCTTGAGGTACAGAGAGAAGAAGAAGAATCGAAGGTTTGAGAAAACCATACGATACGCCTCGAGAAAAGCATACGCCGAAACACGGCCTAGAGTTAAAGGCCGATTCGCAAAACGAAACGACAGCCAGTCCGACGTCGACCGTATATACAGTTCCGTTGCAGCTAGTTTTCACTCGGAGCATCAATACGGCATCGTTCCGTCGTTTTGA 750 49.87 MVKSSSAAFNFLVYNGADVGIVAGGRKDDGEAASWLLMNQGFNSKLMEGEQLKSEDTFLSEMDMFNDFEYPNPTSGTDSVVPVQTKQVLAAAAISHSNENCFNIDFCRSKLNSFTYPSQGLSHSISSSSLDVGIVPDGNSGNSLSEISFSFSGNVVEAGVSGSATAEQVTPLCGLDREAKVLRYREKKKNRRFEKTIRYASRKAYAETRPRVKGRFAKRNDSQSDVDRIYSSVAASFHSEHQYGIVPSF 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2903567 2904413 - Bma000525.1 Bma01g00353 74870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00353 249 ProSiteProfiles CCT domain profile. 177 219 IPR010402 GO:0005515
Bma01g00353 249 Pfam CCT motif 177 219 IPR010402 GO:0005515
Bma01g00353 249 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 6 249 IPR045281 GO:0009909
Bma01g00353 249 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 5 6 249 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g00353 Bma06g00924 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00353 Bma-Chr1:2903567 Bma06g00932 Bma-Chr6:45146901 1.14E-132 dispersed
Bma01g00353 Bma-Chr1:2903567 Bma06g00924 Bma-Chr6:44829716 1.14E-132 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56634 PF06203 CCT 1.00E-17 CL0281 Bma TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00353 - - zju:107415202 282.337