Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00367 ATGCAGAGACAGACTAGGTTAATGGAGAGGACGAACTCTATGAGAGGAAAAAGGAGCTTGGAGGGTGGCGATGAGGAGCAACAGGAGCGAAAGCGGCCTGCCCTTGCCAGTGTGATTGTGGAAGCGCTGAAGGTGGATAGTTTGCAGAAGCTGTGCTCATCTTTGGAGCCTATCCTCCGAAGAGTTGTGAGTGAGGAAGTGGAACGTGCTTTGGCAAAGTTACCTCCTGCTAGACTTAGTGGAAGGTCTTCTCCAAAACGTATTGAAGGTCCTGATGGAAGAAATTTACAACTGCAGTTTAGATCTAGATTATCTCTTCCCTTGTTCACTGGAGGGAAAGTGGAAGGCGAGCAGGGTGCCACAATTCATATTGTTCTACTTGATGTCAACCGTGGACGTGTTGTAACTTCAGGTCCTGAAGCATCAGCAAAACTAGATGTTGTTGTCCTTGAAGGTGATTTCAACAATGAAGATGATGAAGACTGGACAGTGGAAGAATTTGAAAGTCATGTGGTGAAGGAGCGTGAAGGAAAAAGGCCTTTATTAACCGGGGATCTCCAAGTTACTTTGAAAGAAGGAGTTGGAACATTAGGAGATCTCACTTTTACTGATAATTCAAGCTGGATCAGGAGCAGAAAGTTTAGACTTGGCTTGAGGATTTCTGCTGGAATGTTTGATGGCACACGGATACGTGAGGCAAAGACCGAAGCATTTACTGTTAAAGATCACAGAGGAGAATTGTACAAGAAACATTATCCTCCAGCATTAAATGATGAAGTATGGAGATTAGAGAAGATCGGGAAAGATGGTTCATTCCATAAAAGACTAAATGCTAACGGAATATTTTCTGTTGAAGACTTCCTTCGATTGGTGGTTCGCGACTCACAAAAGCTACGGACTATTCTTGGGAGTGGAATGTCGAACAAGATGTGGGAAGCTCTCTTAGAGCATGCTAAAACATGTGTGCTTAGTGAGAAGCTTTATATTTACTATTCTGAGGATACAAGAAATGTTGGAGTTGTGTTCAACAATATTTTTGAGCTAAGTGGCCTAATTGCAGGAGATCAATATCATTCTGCCAACTCGCTTTCTGACAATCAGAAGGTCTTTGTTGATGCACAGGTGAAAAAAGCATATGATAATTGGGATCAAGTTGTCGAGTATGATGGGAAGTCACTTTTTAGCTTCAAGCAAACAAAGAAGTCAAGCATATCCAGGAATGAACATCATGCTGGCCATCTTGATTTCTCAAATACTGTAGAGCATGAAATGCCACTACCACGCCTGCCTGTGTCAGTACCATCCGAACAGGCTTTAGTAGGATCAGGTCTGCCTGTGGGAGGTTCTGTTTATAATGATAGCATGGCCACAAGATATTCAAACCAGTCACAGGTTGCGAATTCAACAAATTCTCGTTCCCGATTTGTAGATACTGGATATGCACAGAACGAGTTGGTTAATAATGCTCACCAAACTCAGAACATGAGAAATGCTCAAACTTCTTTCAGTTTGGCCCTTGGCCCACCCCAATCGTCCGTGTCTGGTTTTCAAACTATTGGCTCATCCAGTCAGCAATCTAACATCAATCCATTCGATGATTGGTCAAACAACCGAGAGAAAGGTGTCGACCACTTCCTTTCAGAGGAAGAGATTCGTCTTAGAAGTCATGAAATGCTTGAAAATGAAGATATGCAGCATTTACTACAAATGTTCAGTATGGGCGGTCATGCGTCTGTAAATATGCCCGACGAAGGATATGGATTTACTCCATTTATGTCATCTCCAATGCCTCCTTTTGAGGAAGATCGAGGCCGGTCTGGAAGAGCTGTAGTTGGGTGGTTGAAAATCAAAGCAGCTATGAGGTGGGGATTCTTCATACGGAAAAAAGCTGCAGAGAGGCGAGCTCAGATTGTTGAGTTGGAAGAGTGA 1929 43.18 MQRQTRLMERTNSMRGKRSLEGGDEEQQERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLPPARLSGRSSPKRIEGPDGRNLQLQFRSRLSLPLFTGGKVEGEQGATIHIVLLDVNRGRVVTSGPEASAKLDVVVLEGDFNNEDDEDWTVEEFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLRISAGMFDGTRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNANGIFSVEDFLRLVVRDSQKLRTILGSGMSNKMWEALLEHAKTCVLSEKLYIYYSEDTRNVGVVFNNIFELSGLIAGDQYHSANSLSDNQKVFVDAQVKKAYDNWDQVVEYDGKSLFSFKQTKKSSISRNEHHAGHLDFSNTVEHEMPLPRLPVSVPSEQALVGSGLPVGGSVYNDSMATRYSNQSQVANSTNSRSRFVDTGYAQNELVNNAHQTQNMRNAQTSFSLALGPPQSSVSGFQTIGSSSQQSNINPFDDWSNNREKGVDHFLSEEEIRLRSHEMLENEDMQHLLQMFSMGGHASVNMPDEGYGFTPFMSSPMPPFEEDRGRSGRAVVGWLKIKAAMRWGFFIRKKAAERRAQIVELEE 642
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3032505 3038712 + Bma000541.1 Bma01g00367 74884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00367 642 PANTHER OS02G0177800 PROTEIN 7 641 IPR012416 GO:0005516
Bma01g00367 642 Pfam Calmodulin binding protein C-terminal domain 326 388 IPR046829 -
Bma01g00367 642 MobiDBLite consensus disorder prediction 10 32 - -
Bma01g00367 642 MobiDBLite consensus disorder prediction 1 32 - -
Bma01g00367 642 Pfam Calmodulin binding protein-like N-terminal domain 96 243 IPR046831 -
Bma01g00367 642 PANTHER CALMODULIN-BINDING PROTEIN 60 B 7 641 - -
Bma01g00367 642 Pfam Calmodulin binding protein central domain 255 321 IPR046830 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g00367 Bma06g00919 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00297 Bma-Chr1:2474799 Bma01g00367 Bma-Chr1:3032505 5.85E-09 dispersed
Bma01g00367 Bma-Chr1:3032505 Bma05g00254 Bma-Chr5:7009302 6.91E-28 dispersed
Bma06g00059 Bma-Chr6:937160 Bma01g00367 Bma-Chr1:3032505 2.94E-22 transposed
Bma08g00181 Bma-Chr8:2216093 Bma01g00367 Bma-Chr1:3032505 8.48E-121 transposed
Bma14g01314 Bma-Chr14:24022786 Bma01g00367 Bma-Chr1:3032505 1.04E-92 transposed
Bma01g00367 Bma-Chr1:3032505 Bma06g00919 Bma-Chr6:44421668 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00367 - - qsu:112013938 998.423