Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00368 ATGGGTTCCCTGCCCAACCAGCATGAATTCATTTTCCGGTCGAAACTCCCCGATATTTACACGGACGTCGTTGCGTTGCCTTATTCGTCCGGAACGACAGGACTACCTAAAGGAGTAATGCTTACCCACAGAGGACTCGTCACTAGCGTTGCTCAACAGGTCGACGGAGAAAACCCAAACTTGTACTTTCACAAAAATGACGTGATACTCTGTACGCTACCAATGTTTCACATCTACTCTCTGAACTCCGTTCTGCTCTGTGCTCTCCGAGTAGGAGCCGCCATTTTAATCGTTCAGAAGTACGACATCAAAGGTTTGCTTGAGCTTGTTGAGAAATACAAGGTGACGATAGCTCCGTTGGTCCCTCCGATTGTGCTAGACATAGCAAAGAGCGCAGAAATGGATAAATACGATTTGTCGACGATAAGAATCGTGATGTCCGGCGCTGCTCCGATGGGGAAGGAGCTTGAAGACACTGTCAGCGCTAAGCTTCCTAATGCCAAGCTAGGCCAGGGGTATGGAATGACAGAGGCTGGGCCAGTGCTATCAATGTGCTTGGCCTTTGCAAAGGAACCGTTCGAGATCAAATCAGGAGCGTGCGGGACCGTGGTAAGAAATGCTGAGATGAAGATCATTGACCCTGAAACTGGACTCTCTCTTCCAAAGAATCAATCAGGAGAGATCTGCATCAGAGGCAGCCAGATCATGAAAGCAGGTTACTTGAACGACGGGGAAGCCACGAAGAGGACCATCGACGGCGACGGGTGGCTCCACACCGGCGACGTGGGCTACATTGATGACGACGATGAGGTTTTTATAGTCGACCGGCTGAAAGAGTTGATCAAGTACAAAGGGTTTCAGGTTGCCCCGGCTGAGCTCGAGGCCTTATTGGCTGCTCATCCTAAGATATCTGCTGCTGCTGTTGTGTCCATGAAAGATGAGACTGCGGGAGAGATTCCAGTTGCTTTTGTTGTTAAATCAAATGGTTGGAAGATTAGTGAGGATGATATCAAGAAGTACATCGCAGATCAGGTTAATTCAGTAAAAACATTGGCGCAGGTGGTGTTCTACAAGAGAATAAGAAGAGTGTTCTTTGTGGAGTCGATTCCAATAGCTCCATCAGGGAAGATCTTGAGAAAGAATTTAAGAGCAAGGCTTGCAGAGATGGAGGCCTAA 1176 48.21 MGSLPNQHEFIFRSKLPDIYTDVVALPYSSGTTGLPKGVMLTHRGLVTSVAQQVDGENPNLYFHKNDVILCTLPMFHIYSLNSVLLCALRVGAAILIVQKYDIKGLLELVEKYKVTIAPLVPPIVLDIAKSAEMDKYDLSTIRIVMSGAAPMGKELEDTVSAKLPNAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIIDPETGLSLPKNQSGEICIRGSQIMKAGYLNDGEATKRTIDGDGWLHTGDVGYIDDDDEVFIVDRLKELIKYKGFQVAPAELEALLAAHPKISAAAVVSMKDETAGEIPVAFVVKSNGWKISEDDIKKYIADQVNSVKTLAQVVFYKRIRRVFFVESIPIAPSGKILRKNLRARLAEMEA 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3042403 3045344 - Bma000542.1 Bma01g00368 74885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00368 391 ProSitePatterns Putative AMP-binding domain signature. 26 37 IPR020845 -
Bma01g00368 391 Gene3D - 11 278 IPR042099 -
Bma01g00368 391 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 21 387 - -
Bma01g00368 391 SUPERFAMILY Acetyl-CoA synthetase-like 21 389 - -
Bma01g00368 391 Gene3D - 279 389 IPR045851 -
Bma01g00368 391 Pfam AMP-binding enzyme C-terminal domain 292 376 IPR025110 -
Bma01g00368 391 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 21 387 - -
Bma01g00368 391 Pfam AMP-binding enzyme 21 283 IPR000873 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00368 Bma-Chr1:3042403 Bma15g00435 Bma-Chr15:4732976 0 dispersed
Bma01g00368 Bma-Chr1:3042403 Bma14g00445 Bma-Chr14:5144008 3.69E-104 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00368 K01904 - twl:119997307 593.578