Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00377 TTATTGGCGCGAACAGCTGCTGCTGAGCCTAGTAAGTTAACTATGGAGGAGAAGAGAGAATTGGTTTATGAAATATCTAAGTGGCCACACGGTGCATCTGAAATACTGCAGTCTTGGAGTCGCCAAGAAATTTTACAAATCCTGTGTGCAGAGATGGGAAAAGAGAGGAAATATACTGGCTTGACAAAATTGAAAATAATAGAAAATCTTCTTAAAATTGTATCTGAAAAGCATTCAGGAGAATCAGATGTCATACAGTTCTCAGCTGCGTTGGGTCATAAAACAGCCAAAAGGCGGAAGAAAACTGATCACCCATCTCAGCTACCAGTTCCTTCGAGCAGTGATTTTGTCACCGATGGTGGTGGCAATTCTAAAAAGACGATCTACTGCAAAAACTCAGCCTGTAAAGCAACCTTAAATCAAGGAGATACATTTTGTAGAAGGTGTTCTTGCTGCATTTGCCATCAGTATGACGACAACAAAGATCCCAGTCTATGGTTAAGTTGCAGTTCGGAGCGGCCATTTCAAGGTTATTCATGTGGAATGTCATGCCATCTTGAATGTGCGATGAAACACGAGAGTTCTGGCATTACAAAAAAACATCACCCAGAGACGGATGGAACTTTTCACTGTGTATCATGTGGCAAGTTGAATGATTTTCTCGGATGCTGGAGAAAACAATTGATAATTGCAAAGGAGACCAGAAGGGTGGACATACTCTGTTATCGTGTCTCCTTAACTCAAAAGCTCATCAACGGAAGTGAAAAGTATGAAAAACTTCATCAGTTGGTAGATGAAGCTGTGGAGAAGCTTGAAACTGAAGTGGGACCGTTAACTGGTCTACCTGTTAAGATGAGTCGAGGTATTGTGAATAGACTTTCTTCGGGGCAAGTGGTTCAAAAACTCTGCGCATCTGCAGAGAAATTACTCGATGAAATAATCCATTCCCTATCCAATCCTATTAAACAAGATTTAAATTTAATTACTCCAAATTTTGTCAAATTTGAAGAAGTCCAAGCAACTTCACTTACTCTAGTTTTGGGTTGTGAAGATATGCCTCCTGATAGTACTATTAGTATCTGGCATCGGAAGTCGTTCCATAACTATTACCCTTTTGATCCAACTTTTACACAATTCGCACCGAATGGAAGGTTTATTTTCACAGGATTAATGCCCGCTTCAGACTACATTTTCAAAGTTTTAGTGTATAACGGAGATAAAGAGATGGTTAGGTGTGAAGCTCAATGCTCAACGAGCAGGGAGGAAGTCAATGAGACGATGGTGATGGAAAGAACTCAAAGTCTGGCCACCATTTGCAGTGACCTTTCAAATCCTTCATCGATGGAAGATGAGACCAACAACATTTTACCTGATCATGACCGGGACAATAATCAAGCTGATAAGTATCTTTCTTACTGCGCCAACAATGAGAAGAGTGTTTATGCTAATTTATCGAATGGTGATACGAACTGCACTGAGATGGGTGGAGAAAGAAAGCCAGTTGATAAAGGTTCTTTGTTGGGCAATGAACACTCCAATGGAATCGCGGCCGAGTTTTCAAAGCTCAAGAAGAACTCATCGGAGGGTCAACTGGATGAGGATATGGACACAGCAAATGGGTCTGAATCTCCTGTCCAGACGGGAATGGAATGTGTGCCATTTAGTTCTTCTGAAGAAGCTTGCTTACCCATAACTCCTTGCAAATTGGAACTGATAAAGTACGGCCTCGGAAAAAGTGGACGGTCCAAATCGAACAGCAAAGAAAAAATGGAGGAGCTTCAAGGTGGGAGGTCAGCAAAGAAAAGAAACGGAGAAAGTCAAGAAGACGAATACGCGGGAAATGGTGTTTCGGATCGAGATTTTGAGTACTACGTGAAGGTGATTCGATGGTTAGAGTGCCAAGGACACATCGAGAAGAATTTCCGACAGAAATTCTTGACTTGGTACAGCTTGAGAGCATCCCAAGAGGAAATAAAAATTGTAAAGGTCTTTGTAGATACCTTCATTGAAGATCCATCTTCTCTGGCCGAGCAACTCGTCGACACTTTCTCGGAAAGTATATCCTGCAACAAAAACTCTATCGTCCAGCCCGGATTCTGCATGAAACTCTGGCATTGA 2118 41.64 LLARTAAAEPSKLTMEEKRELVYEISKWPHGASEILQSWSRQEILQILCAEMGKERKYTGLTKLKIIENLLKIVSEKHSGESDVIQFSAALGHKTAKRRKKTDHPSQLPVPSSSDFVTDGGGNSKKTIYCKNSACKATLNQGDTFCRRCSCCICHQYDDNKDPSLWLSCSSERPFQGYSCGMSCHLECAMKHESSGITKKHHPETDGTFHCVSCGKLNDFLGCWRKQLIIAKETRRVDILCYRVSLTQKLINGSEKYEKLHQLVDEAVEKLETEVGPLTGLPVKMSRGIVNRLSSGQVVQKLCASAEKLLDEIIHSLSNPIKQDLNLITPNFVKFEEVQATSLTLVLGCEDMPPDSTISIWHRKSFHNYYPFDPTFTQFAPNGRFIFTGLMPASDYIFKVLVYNGDKEMVRCEAQCSTSREEVNETMVMERTQSLATICSDLSNPSSMEDETNNILPDHDRDNNQADKYLSYCANNEKSVYANLSNGDTNCTEMGGERKPVDKGSLLGNEHSNGIAAEFSKLKKNSSEGQLDEDMDTANGSESPVQTGMECVPFSSSEEACLPITPCKLELIKYGLGKSGRSKSNSKEKMEELQGGRSAKKRNGESQEDEYAGNGVSDRDFEYYVKVIRWLECQGHIEKNFRQKFLTWYSLRASQEEIKIVKVFVDTFIEDPSSLAEQLVDTFSESISCNKNSIVQPGFCMKLWH 705
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3102288 3105123 + Bma000551.1 Bma01g00377 74894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00377 705 Coils Coil 254 274 - -
Bma01g00377 705 MobiDBLite consensus disorder prediction 491 510 - -
Bma01g00377 705 MobiDBLite consensus disorder prediction 106 121 - -
Bma01g00377 705 MobiDBLite consensus disorder prediction 441 461 - -
Bma01g00377 705 PANTHER VIN3-LIKE PROTEIN 2-RELATED 8 705 - -
Bma01g00377 705 CDD PHD_VIN3_plant 150 214 - -
Bma01g00377 705 PANTHER VIN3-LIKE PROTEIN 2-RELATED 8 705 IPR044514 GO:0010048|GO:0040029
Bma01g00377 705 MobiDBLite consensus disorder prediction 523 546 - -
Bma01g00377 705 MobiDBLite consensus disorder prediction 579 613 - -
Bma01g00377 705 MobiDBLite consensus disorder prediction 582 613 - -
Bma01g00377 705 Pfam PHD - plant homeodomain finger protein 130 248 IPR032881 -
Bma01g00377 705 MobiDBLite consensus disorder prediction 96 121 - -
Bma01g00377 705 MobiDBLite consensus disorder prediction 532 546 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g00377 Bma06g01054 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00377 Bma-Chr1:3102288 Bma01g01376 Bma-Chr1:21384879 7.65E-21 dispersed
Bma01g00377 Bma-Chr1:3102288 Bma01g00411 Bma-Chr1:3442039 3.06E-24 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00377 - - zju:107428695 858.981