Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00382 GAGAAAATTCCTATTGAGGAAGTGTTTCAGCAATTGAAATGCAGCCGAGAAGGGTTGTCATTTCAGGAGGGGGAAAACCGGCTTCAAATCTTCGGTCCCAACAAACTAGAGGAGAAAAAGGAAAGCAAGATTCTGAAATTTTTAGGATTCATGTGGAATCCTCTTTCATGGGTGATGGAGGCTGCTGCTATAATGGCTATTGCTTTAGCTAATGGTGGGGGAAAAAAGCCTCCAGATTGGCAGGATTTTCTTGGAATTATTTGTTTGCTGGTTATCAACTCCACCATCAGTTTCATTGAAGAAAATAATGCTGGCAATGCAGCTGCTGCTCTTATGGCTGGTCTTGCACCTAAAACTAAGGTTCTTAGGGATGGAAAATGGAGCGAACAAGATGCTGCAATTTTAGTACCAGGAGATGTCATTAGTGTTAAATTGGGGGATATCATCCCAGCTGATGCTCGTCTTCTTGAGGGCGATCCATTAAAAATTGACCAATCTGCCCTCACTGGAGAATCACTCCCAGTGACCAAACATCCTGGGGATGAAGTTTTCTCTGGTTCAACGTGCAAGCAAGGAGAGATTGAAGCTGTCGTTATTGCCACTGGTGTTCATACGTTCTTTGGAAAGGCTGCTCATCTCGTTGATAGCACCAATCAAGTTGGTCACTTTCAGAAGGTTCTCACTGCAATCGGGAACTTCTGTATATGTTCTATCGCAGTTGGAATGTTGATAGAACTTATTGTCATGTATCCGATTCAGCACCGACAGTATCGTGATGGAATCGACAATCTTCTCGTTCTTTTGATCGGAGGAATTCCTATTGCCATGCCTACTGTTTTATCTGTCACAATGGCAATTGGGTCGCACAAGCTATCCCAGCAGGGTGCAATCACCAAGCGGATGACTGCAATAGAAGAAATGGCTGGCATGGATGTTCTTTGCAGCGACAAAACTGGGACACTCACTCTTAACAAACTTAGTGTCGATAAGAGTTTAATTGAGGTATTTGCCAAAGGTGTTGATAAAGAGCATGTCATTTTATTAGCGGCAAGGGCATCAAGGACAGAAAACCAAGATGCCATTGATGCCGTCTTTGTTGGAATGCTTGCTGATCCAAAGGAGGCACGTGCGGGCATAACAGAAGTGCACTTCTTGCCTTTCAATCCTGTCGATAAAAGAACTGCATTGACTTATATTGATTCAAACGGAAATTGGCATCGAGCTAGCAAGGGTGCTCCTGAACAAATTATAGCTCTTTGCAATTGCAAAGAAGACGTGAGGAAGAAAGTTCATAATATAATTGACAAATTTGCTGAACGTGGCCTCCGATCGTTAGCCGTAGCCAGACAGGTAGTGCCCGAGAAAAGTAAGGAAAGTCCAGGTGCTCCATGGGAATTTGTTGGTTTATTGCCTCTCTTTGATCCACCAAGACATGACAGTGCAGAGACCATACGAAGAGCTCTCCATCTTGGCGTGAACGTCAAGATGATTACGGGTAACTTGATTCATGTTGATATGAAATTAGGACAAGGATATGCTTTGGAAGTATTAATGTTTAGTGTTTTATATGTAGGTGATCAACTTGCCATAGCAAAGGAAACTGGCCGCCGTCTGGGAATGGGAACAAACATGTATCCCAGCGCTTCCTTACTTGGCCAACACAAGGACGAAAGCATCGCCGGCCTTCCGGTAGAAGAGCTTATAGAGAAAGCAGATGGATTTGCTGGAGTCTTCCCAGAGCACAAATATGAAATTGTTAAGAAGTTGCAAGAGCAGAAACACATATGTGGAATGACGGGGGATGGTGTGAACGATGCTCCTGCTTTAAAGAAAGCAGATATTGGAATTGCTGTTGCCGATGCTACTGATGCAGCACGAAGTGCATCGGATATTGTTCTTACTGAACCTGGTTTGAGTGTCATTATTAGTGCAGTCCTCACAAGCCGAGCTATTTTTCAAAGAATGAAGAACTATACGGTTTTATGCCTTATTTTTTTCATTGTGATTTTACAGTTTGGTTTCATGTTGATTGCCCTCATATGGAAATTTGATTTCTCTCCATTCATGGTTTTAATTATTGCAATTCTAAACGATGGTACGATAATGACGATATCGAAGGATAGAGTGAAGCCGTCTCCATTGCCTGATAGCTGGAAGTTAAAAGAAATATTTGCTACTGGAATTGTGCTTGGAGGCTACTTGGCATTGATGAGTGTCATATTCTTCTGGTTAATGAAAGACACTGATTTCTTCACGGATAAATTTGGTGTAAAATCAATTAGGAATAGCCCTGAAGAGATGATGGCTGCTTTATACCTCCAAGTTAGTATAGTAAGCCAGGCCCTCATTTTTGTAACTCGCTCTCGTAGCTGGTCATTTGTCGAACGCCCCGGCCTTCTTTTATTGACGGCCTTTTTAATCGCACAACTGTCAATTAATAATTTTACTGCCTTCACCACCAAGAAAGACTACGGAAAAGAGGAAAGGGAAGCTCAATGGGCTCTTGCTCAAAGAACCCTCCATGGCCTTCAGCCGCCACAAGCAACTGACCTTTTCGCCGAAAAGAGTAGCTATCGAGAACTTTCCGAGATCGCCGAGCAAGCTAAGAGAAGAGCTGAGATTGCAAGTTTATTTGTTGGGATTTTTAGGCTTCGAGAGCTTCACACGCTCAAGGGTCACGTAGAGTCAGTAGTGAAGCTCAAAGGGCTAGACATCGATACGATCCAGCAGCATTACACCGTATGA 2745 43.1 EKIPIEEVFQQLKCSREGLSFQEGENRLQIFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKKPPDWQDFLGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQDAAILVPGDVISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMLIELIVMYPIQHRQYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFAKGVDKEHVILLAARASRTENQDAIDAVFVGMLADPKEARAGITEVHFLPFNPVDKRTALTYIDSNGNWHRASKGAPEQIIALCNCKEDVRKKVHNIIDKFAERGLRSLAVARQVVPEKSKESPGAPWEFVGLLPLFDPPRHDSAETIRRALHLGVNVKMITGNLIHVDMKLGQGYALEVLMFSVLYVGDQLAIAKETGRRLGMGTNMYPSASLLGQHKDESIAGLPVEELIEKADGFAGVFPEHKYEIVKKLQEQKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVLCLIFFIVILQFGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIVLGGYLALMSVIFFWLMKDTDFFTDKFGVKSIRNSPEEMMAALYLQVSIVSQALIFVTRSRSWSFVERPGLLLLTAFLIAQLSINNFTAFTTKKDYGKEEREAQWALAQRTLHGLQPPQATDLFAEKSSYRELSEIAEQAKRRAEIASLFVGIFRLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 914
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3148232 3158271 + Bma000556.1 Bma01g00382 74899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00382 914 PRINTS H+-transporting ATPase (proton pump) signature 772 793 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma01g00382 914 PRINTS H+-transporting ATPase (proton pump) signature 430 448 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma01g00382 914 SUPERFAMILY HAD-like 307 653 IPR036412 -
Bma01g00382 914 ProSitePatterns E1-E2 ATPases phosphorylation site. 316 322 IPR018303 -
Bma01g00382 914 PANTHER PLASMA MEMBRANE ATPASE 521 811 - -
Bma01g00382 914 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 574 689 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma01g00382 914 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 86 334 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma01g00382 914 SFLD p-type atpase 296 650 IPR044492 -
Bma01g00382 914 SUPERFAMILY Calcium ATPase, transduction domain A 117 214 IPR008250 -
Bma01g00382 914 Pfam haloacid dehalogenase-like hydrolase 310 613 - -
Bma01g00382 914 PRINTS P-type cation-transporting ATPase superfamily signature 599 618 - -
Bma01g00382 914 PRINTS P-type cation-transporting ATPase superfamily signature 164 178 - -
Bma01g00382 914 PRINTS P-type cation-transporting ATPase superfamily signature 622 634 - -
Bma01g00382 914 PRINTS P-type cation-transporting ATPase superfamily signature 468 479 - -
Bma01g00382 914 PRINTS P-type cation-transporting ATPase superfamily signature 314 328 - -
Bma01g00382 914 PRINTS P-type cation-transporting ATPase superfamily signature 490 500 - -
Bma01g00382 914 CDD P-type_ATPase_H 18 810 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bma01g00382 914 Gene3D - 856 914 - -
Bma01g00382 914 Pfam E1-E2 ATPase 116 293 - -
Bma01g00382 914 Gene3D - 326 473 IPR023299 GO:0000166
Bma01g00382 914 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 18 507 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bma01g00382 914 PANTHER CALCIUM-TRANSPORTING ATPASE 1 516 - -
Bma01g00382 914 PANTHER CALCIUM-TRANSPORTING ATPASE 813 887 - -
Bma01g00382 914 PANTHER PLASMA MEMBRANE ATPASE 1 516 - -
Bma01g00382 914 SFLD Haloacid Dehalogenase 296 650 - -
Bma01g00382 914 PANTHER CALCIUM-TRANSPORTING ATPASE 521 811 - -
Bma01g00382 914 SUPERFAMILY Calcium ATPase, transmembrane domain M 2 810 IPR023298 -
Bma01g00382 914 SMART Cation_ATPase_N_a_2 1 71 IPR004014 -
Bma01g00382 914 Pfam Cation transporter/ATPase, N-terminus 2 65 IPR004014 -
Bma01g00382 914 PANTHER PLASMA MEMBRANE ATPASE 813 887 - -
Bma01g00382 914 Gene3D - 50 129 - -
Bma01g00382 914 Gene3D - 178 318 - -
Bma01g00382 914 Gene3D - 600 845 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00382 Bma-Chr1:3148232 Bma02g00062 Bma-Chr2:498185 0 dispersed
Bma01g00382 Bma-Chr1:3148232 Bma06g01014 Bma-Chr6:46708766 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00382 K01535 - dcr:108227379 1380.93