Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00394 ATGTTTAAAGCAATGGAAATGACTATCCCAGAATTTGGCTTTATTGTTATTGTATTTTTGGCCTTCTCTATTTTAGGGAAGGCTGAGGTTTACATAGTCACAGTGGAAGGAGACCCAGTGACGAGTTACAAAGGTGGGGTCAATGGCTTTGAAGCGACAGCTGTGGAATTTGAAGAAAAAATTGACACTACCAGTGAATTGGTGACATCTTATGCCCGTCACTTAGAAAAGAAACATGATATGCTTCTTGGAATGTTGTTCAAGAGTGGGACCTATAAGAAATTATACAGCTATCGACATCTCCTCAATGGATTTGCAGTTCATATTACACCTGAACAGGCAGAAATCTTAAGACGCGCACCGAGTGTGAAATCTGTTGAGAGAGACTGGAAGGTGAGGAGACTTACCACGCACACCCCTCAATTTTTGGGGCTTCCAACTGAGGTATGGCCAACAGGAGGTGGTTTTGACAGGGCTGGAGAGGACATTGTGATAGGATTTGTGGACTCGGGTATCTATCCTCATCATCCAAGTTTTGCAACCTACAATACTGAACCGTTTGGGCCTGTTTCAAGGTATAGAGGAAAATGTGAAGTTGACCTTGACACTAAGAAGGACTTTTGTAATGGGAAGATTGTTGGCGCTCAACATTTTGCTGAAGCGGCTAAAGCAGTTGGGGCATTTAATCCTTCTGTTGATTTTGCTTCTCCTTTGGATGGTGATGGACATGGAAGTCATACAGCAGCTATTGCAGCTGGAAATAATGGCATTCCTGTGAGAATGCATGGCTATGAATTTGGAAAAGCTAGTGGCATGGCTCCCCGTGCCAGGATTGCTGTGTACAAAGCAATCTACAGGCTCTTTGGCGGATTTGTTGCGGATGTTGTAGCTGCTATCGATCAGGCTGCACATGATGGGGTTGACATACTCAGTCTCTCAGTGGGACCTAACAGTCCCCCAGCAACTACCAAGACCACATTTTTAAACCCTTTCGATGCTACACTTCTTTCAGCAGTGAAGGCAGGTGTATTTGTCGCGCAGGCCGCTGGTAATGGAGGTCCTTTCCCTAAAACTTTGGTTTCCTATAGCCCTTGGATAACATCTGTTGCTGCTGCAATTGACGATCGGAGATACAAAAATCATCTGACCCTTGGAAATGGAAAAATTTTATCAGGAATTTGTTTATCACCTTCTACTCATTTAAATGAAACATATACCTTGGTAGCAGCAAATGACGTGTTGCTAGATTCTTCTGTAATGAAATTCAGTCCATCTGACTGTCAGAGGCCTGAAGTTTTAAATAAGAACTTGGTTGAAGGAAACATTCTTCTCTGTGGTTATTCCTTCAATTTTGTCGTTGGTTCAGCATCAATTAAAAAAGTCTCAGAAACAGCTAGGAGCCTTGGTGCAGTTGGCTTTGTCCTTGCTGTAGAAAATGTTTCTCCAGGAGCAAAATTTGATCCTGTTCCAGTCGGACTTCCTGGAATTCTCATCACCAATGTCAGCAAGTCGATGGATCTTATTGATTATTACAACACCTCTACATCAAGAGATTGGACTGGAAGAGTGAAAAGCTTCAAAGCTGTAGGTAGAATCGGGGATGGTTTAATGCCAATACTACACAAATCAGCTCCGCAGGTGGCATTATTTTCAGCTCGAGGGCCCAACATAAGAGATTTTAACTTCCAAGATGCTGATCTTCTGAAACCAGATATCCTGGCACCTGGTTCTCTCATTTGGGCTGCTTGGTCTCCAAATGGAACAGATGAGCCTAATTATGTCGGAGAGAGATTTGCGATGATTTCTGGAACTAGCATGGCAGCTCCACATATAGCTGGAATAGCTGCTCTTATTAAACAGAAGCACCCTGATTGGAGCCCTGCTGCTATTAAATCAGCCTTGATGACAACCTCAACAACAATTGACAGAGCAGGAAGACCCATTCAAGCACAGCAATATTCTGAAACGGAAACATTGAATCTGGTTATTGGCACACCATTTGATTATGGAAGTGGTCATGTAAATCCAAGTGCCGCTTTGGATCCTGGTCTCATCTTTGATGCAGGTTACGAGGATTACCTGGGATTTCTATGCACAACGCCTGGCATTGACGTTCATGAGATAAGTAACTACACAAGCTCACCCTGCAACTTCTCAATGATCCACCCTTCAAACCTCAACACCCCATCAATTACCATCTCCCATCTTGTGGGAACTCGAACAGTCACTCGGACTGTAACAAATGTCGATGAGGAAGAAACTTACGTAATCACCACAAGAATGGATCCTTCCATTGCAATTGAAGCGTTCCCTCCAATCATGACTCTGACCACTGGTTTCTCTAGGAAATTCTCTGTCACTCTCACCGTACGATCGGTCACAGGATCGTATTCTTTTGGGGAGGTTGTGCTCAAAGGCAGCAGAGGACACCAAGTGAGAATACCTGTCGTAGTGATGGGATATCCAAGGTAA 2472 43.65 MFKAMEMTIPEFGFIVIVFLAFSILGKAEVYIVTVEGDPVTSYKGGVNGFEATAVEFEEKIDTTSELVTSYARHLEKKHDMLLGMLFKSGTYKKLYSYRHLLNGFAVHITPEQAEILRRAPSVKSVERDWKVRRLTTHTPQFLGLPTEVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFATYNTEPFGPVSRYRGKCEVDLDTKKDFCNGKIVGAQHFAEAAKAVGAFNPSVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGYEFGKASGMAPRARIAVYKAIYRLFGGFVADVVAAIDQAAHDGVDILSLSVGPNSPPATTKTTFLNPFDATLLSAVKAGVFVAQAAGNGGPFPKTLVSYSPWITSVAAAIDDRRYKNHLTLGNGKILSGICLSPSTHLNETYTLVAANDVLLDSSVMKFSPSDCQRPEVLNKNLVEGNILLCGYSFNFVVGSASIKKVSETARSLGAVGFVLAVENVSPGAKFDPVPVGLPGILITNVSKSMDLIDYYNTSTSRDWTGRVKSFKAVGRIGDGLMPILHKSAPQVALFSARGPNIRDFNFQDADLLKPDILAPGSLIWAAWSPNGTDEPNYVGERFAMISGTSMAAPHIAGIAALIKQKHPDWSPAAIKSALMTTSTTIDRAGRPIQAQQYSETETLNLVIGTPFDYGSGHVNPSAALDPGLIFDAGYEDYLGFLCTTPGIDVHEISNYTSSPCNFSMIHPSNLNTPSITISHLVGTRTVTRTVTNVDEEETYVITTRMDPSIAIEAFPPIMTLTTGFSRKFSVTLTVRSVTGSYSFGEVVLKGSRGHQVRIPVVVMGYPR 823
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3251914 3259816 + Bma000568.1 Bma01g00394 74911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00394 823 CDD Peptidases_S8_3 136 639 IPR034197 -
Bma01g00394 823 ProSitePatterns Serine proteases, subtilase family, serine active site. 603 613 IPR023828 -
Bma01g00394 823 Pfam Peptidase inhibitor I9 30 133 IPR010259 -
Bma01g00394 823 Gene3D Peptidase S8/S53 domain 162 693 IPR036852 GO:0004252|GO:0006508
Bma01g00394 823 SUPERFAMILY Protease propeptides/inhibitors 92 133 - -
Bma01g00394 823 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 165 176 IPR023827 -
Bma01g00394 823 Gene3D - 375 540 - -
Bma01g00394 823 PRINTS Subtilisin serine protease family (S8) signature 239 252 IPR015500 -
Bma01g00394 823 PRINTS Subtilisin serine protease family (S8) signature 160 179 IPR015500 -
Bma01g00394 823 PRINTS Subtilisin serine protease family (S8) signature 602 618 IPR015500 -
Bma01g00394 823 ProSiteProfiles Serine proteases, subtilase domain profile. 129 680 - -
Bma01g00394 823 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 822 IPR045051 -
Bma01g00394 823 PANTHER CUCUMISIN-RELATED 20 822 - -
Bma01g00394 823 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 134 IPR037045 -
Bma01g00394 823 Gene3D - 697 820 - -
Bma01g00394 823 CDD PA_subtilisin_like 382 520 - -
Bma01g00394 823 Pfam Subtilase family 160 641 IPR000209 GO:0006508|GO:0008236
Bma01g00394 823 Pfam Fibronectin type-III domain 725 818 IPR041469 -
Bma01g00394 823 SUPERFAMILY Subtilisin-like 135 684 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00394 Bma-Chr1:3251914 Bma06g01026 Bma-Chr6:46919350 0 dispersed
Bma05g00871 Bma-Chr5:46325312 Bma01g00394 Bma-Chr1:3251914 6.05E-10 transposed
Bma14g00912 Bma-Chr14:10286578 Bma01g00394 Bma-Chr1:3251914 0 transposed
Bma01g00394 Bma-Chr1:3251914 Bma06g01023 Bma-Chr6:46887749 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00394 - - qsu:111993119 1424.45