Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00415 ATGGCCTCCATTCCTTCTTCTGGGTTTTTGCTAATCTTCTTCGTTTTCCTTCTTCAACCGGGTCGCCCTGTTGTGTCCGAACCCACCCAGGACAAGCAGGCTCTCCTTGATTTTCTGTCTCGAATTCCTCATGCTAATAGAGTTCGATGGGAATCCTCAGATTCTGCCTGTAATTGGTTCGGAGTGGTGTGTGATCCCACTCAGTCGTTTGTTTATGCTCTACGATTGCCCGGAGTCGGCCTCGTTGGTTCCATTCCGGAGAACTCGGTCAGCAGGTTGAGTCAGCTTCGAGTTCTGAGTCTCCGTTCGAATCGTCTCTCTGGCGAGCTTCCCTCTGATTTTTCCAATTTGACGCTTCTGCGGAATCTTTATTTGCAGCATAATGAACTCTCCGGAGAGTTCCCAACAAGTTTGGTTTCTTTGGCTCGTTTGACTCGGCTGGATTTGTCTTTCAACAACTTTTCCGGCTCCATTCCGTCGTCTATCAACAATCTCACTCACTTGACCGGACTTTTCCTGGAAAACAATGGATTCTTCGGTGACTTATCTGGCATCGGAGCCGGCAGTTTATCCAGCTTCAATGTATCTAACAACAAGCTCAATGGCTCAATTCCCGAGAGTTTAAGGAAATTTCCGGCTTCCTCGTTCGCCGGAAACCTAGATCTCTGCGGGGAACCATTGTCTTCGTGCAATCCATCTGAATCTCCGGCGAATCCGGTTGGCAAAAAGTCTAAAAGACTCTCAACAGCCGCAATTATCGGAATCGTAATCGCCTCCGCTTTCGTAGCATTTCTCCTCCTCCTTTGCCTTTTACTCTGTCTCCGCAATCGCAAGCGCAAGCGCCGGCAGCCGGCGAAGCCACCAAAACCAGCTATTCAAACCCGCTCGGTCGAGGCGGAGGCTGGAACCTCGTCGTCAAAAGACGACATTACGGGAGGATCAATCGACGCAGAGAGAAACAAGCTTGTTTTCTTCGAAGGCGGCATTTACAGCTTCGATTTGGAAGATTTGTTAAGAGCTTCGGCAGAAGTTCTTGGGAGAGGAAGCGTCGGAACTTCGTACAAAGCGGTATTGGAAGACGGAACTACAGTAGTAGTGAAGAGATTGAAGGATGTGGTAGTGACGAAGAAGGAATTCGAGTCGACTATGAAGGTAGTGGGGAAGATGAAGCACGAAAATGTGGTTCCGGTCAGAGCTTTTTACTACTCCAAGGACGAGAAACTGCTTGTTTTAGATTTCATGGCTGCCGGTAGCTTGTCCGCTTTGCTTCACGGAAGCAGAGGGTCCGGCCGGACGCCTTTAGACTGGTCCACCCGGTTAAAGATTGCCCTGAGCACCGCAAGAGGCTTATCTTATCTACACGTCACCGGCAAACTAGTTCATGGCAACCTAAAAGCGTCCAACGTTCTGCTCCGACCCGATTATGAGGCCTCACTTTCCGATTTCGGACTCAACCCGCTTTTCGGCACTTCCACCCCACCCAACCGGGTCGCCGGGTATCGCGCGCCGGAAGTCTTGGAAATCCGGAAAGTAACGTTCAAGTCCGACGTGTACAGCTTCGGCGTACTTCTGTTAGAGCTACTCACCGGAAAAGCGCCCAACCAATCGTCGCTGGGGGAAGAAGGGATCGATCTGCCGCGGTGGGTCCAGTCGGTGGTCCAGGAGGAGTGGACGGCGGAGGTTTTTGATGTGGAGCTAATGAGGTACGATAATATTGAAGAAGAGATGGTTCAGCTGTTACAGATTGCGATGACATGTGTTGCGATTGTTCCGGACCAGAGACCTGAGACAGGAGAGGTGGTACGTCTGATCGAGGAGATTCGTAGGAGCGAGACTGAGGATGGGTTACGACATTCGTCTGATGATCCCTCGAAAGGATCAGACGGTCAGAGTTGGACTCCGGAAATAAGGAGCTCGCCTAGAGGGGTCACACGCGCACCCTAG 1944 51.03 MASIPSSGFLLIFFVFLLQPGRPVVSEPTQDKQALLDFLSRIPHANRVRWESSDSACNWFGVVCDPTQSFVYALRLPGVGLVGSIPENSVSRLSQLRVLSLRSNRLSGELPSDFSNLTLLRNLYLQHNELSGEFPTSLVSLARLTRLDLSFNNFSGSIPSSINNLTHLTGLFLENNGFFGDLSGIGAGSLSSFNVSNNKLNGSIPESLRKFPASSFAGNLDLCGEPLSSCNPSESPANPVGKKSKRLSTAAIIGIVIASAFVAFLLLLCLLLCLRNRKRKRRQPAKPPKPAIQTRSVEAEAGTSSSKDDITGGSIDAERNKLVFFEGGIYSFDLEDLLRASAEVLGRGSVGTSYKAVLEDGTTVVVKRLKDVVVTKKEFESTMKVVGKMKHENVVPVRAFYYSKDEKLLVLDFMAAGSLSALLHGSRGSGRTPLDWSTRLKIALSTARGLSYLHVTGKLVHGNLKASNVLLRPDYEASLSDFGLNPLFGTSTPPNRVAGYRAPEVLEIRKVTFKSDVYSFGVLLLELLTGKAPNQSSLGEEGIDLPRWVQSVVQEEWTAEVFDVELMRYDNIEEEMVQLLQIAMTCVAIVPDQRPETGEVVRLIEEIRRSETEDGLRHSSDDPSKGSDGQSWTPEIRSSPRGVTRAP 647
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3475932 3478187 + Bma000592.1 Bma01g00415 74932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00415 647 PANTHER OS05G0480400 PROTEIN 14 625 - -
Bma01g00415 647 MobiDBLite consensus disorder prediction 610 647 - -
Bma01g00415 647 Gene3D Phosphorylase Kinase; domain 1 309 413 - -
Bma01g00415 647 ProSiteProfiles Protein kinase domain profile. 339 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00415 647 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Bma01g00415 647 Pfam Leucine rich repeat 83 130 IPR001611 GO:0005515
Bma01g00415 647 MobiDBLite consensus disorder prediction 282 312 - -
Bma01g00415 647 Gene3D Ribonuclease Inhibitor 189 230 IPR032675 -
Bma01g00415 647 Gene3D Ribonuclease Inhibitor 28 185 IPR032675 -
Bma01g00415 647 SUPERFAMILY L domain-like 49 230 - -
Bma01g00415 647 PANTHER OS05G0588300 PROTEIN 14 625 - -
Bma01g00415 647 Pfam Protein kinase domain 342 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00415 647 Gene3D Transferase(Phosphotransferase) domain 1 414 626 - -
Bma01g00415 647 SUPERFAMILY Protein kinase-like (PK-like) 343 604 IPR011009 -
Bma01g00415 647 MobiDBLite consensus disorder prediction 610 624 - -
Bma01g00415 647 CDD STKc_IRAK 345 607 - -
Bma01g00415 647 MobiDBLite consensus disorder prediction 297 311 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g00415 Bma06g01049 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00266 Bma-Chr1:2221967 Bma01g00415 Bma-Chr1:3475932 7.27E-108 dispersed
Bma01g00415 Bma-Chr1:3475932 Bma12g01282 Bma-Chr12:45808296 0 dispersed
Bma07g01678 Bma-Chr7:52362916 Bma01g00415 Bma-Chr1:3475932 1.31E-110 transposed
Bma08g01137 Bma-Chr8:50320801 Bma01g00415 Bma-Chr1:3475932 9.75E-17 transposed
Bma08g01217 Bma-Chr8:51208071 Bma01g00415 Bma-Chr1:3475932 0 transposed
Bma01g00415 Bma-Chr1:3475932 Bma06g01049 Bma-Chr6:47314103 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66253 PF00069 Pkinase 3.30E-36 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00415 - - jre:108992676 890.567