Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00422 TTCTTCTTCTTCTTACTTTTGAAAATGGTGGTTTTGCTTTGGTGGAGACCCAGAAAAATTGAATCCCATTTCTCCAAACAAGAAATCAGAGGACCCCCTTACCGGTTTTTCATCGGAAATGTCAAGGAACTCGTCGGAATGATGACGACGGCCTCTTCTCAGCCCATGCCTCTCTCCCACAACATTCTTCCTCGGGTTCTTCCTTTCTTTCATCACTGGCGAAAAATCTATGGTTCCACATTTCTGGTGTGGTTTGGACCCAATTATCGACTCGCAGTCTCTGATCCAGACCTAATCCGTGAAATCTTCACCTCAAAAGCTGAATTTTACGAGAAAAACGAAGCTCACCCACTGATCAAACAGCTTGAAGGCGATGGCTTATTGAGCCTCAAGGGTGAAAAATGGGCGCACCATAGAAAACTCATCTCCCCCACTTTCCACATGGAAAATCTCAAACTATCAATGCCGGTGATCGCGAAAAGTGTCGTTGAAATGGCCGACAAGTGGTCGGAAATGTCGGATTCCGGAGAGGTGGAAATCGATGTATCCAAGTGGTTCCAAACCCTAACCGAAGATGTCATTACAAGAACCGCCTTTGGTAGTAGCTATGAAGATGGAAAAGCCATTTTCAAGCTCCAAGCTCTGCAAATGGAGATTGTTTCTCAAGCATTGCAGGAGGTTCATATTCCCGGTTATAGGTTTCTACCCACTAGAACAAACTGGAAATCGAGGAAGTTGGACCGGAAAATCAAGAAATCGTTGTCGAAGTTGATCGATCGTCGGATAGAAGACTCGAGTTCCGGCAAGGGTCTAAATCCCGACAAAAAGGGTTCAAAGGATTTATTAGGGTTGATGATCCAAGCTTCAAATTCAAGCGTTTCTTCAACTATCACTGTCAATGACATAGTTGAGGAGTGCAAGACCTTTTTCTTTGCTAGCAAACAGACAACATCCAATTTGCTGACGTGGACAGTTGTTCTCATGGCAATGCATCCACTGTGGCAGGATCTGGCACGTGACGAAGTGGTGACTGTGTGTGGATCACGTGATGTGCCCTCCAAGGATAATATTATAAAGCTTAAGACGCTTAGCAAGATATTAAATGAGTCACTGAGGTTATACCCGCCGATAGTTGCGACCATCAGACGCGCCAAAACCGACACAGAGCTCGGAGGATATAAAATTCCGAGTGGGACTGAGATTTTGATTCCAATCATAGCCGTTCATCATGATCACGCAATATGGGGAAACGATGCCAATGAATTCAACCCGGGTAGATTCTCCGAAGGCGTCGCGCGTGCGGCCAACCATCCGATGGGGTTTTTCCCCTTTGGCCTCGGAGTTCGCACGTGCATCGGCCAAAACTTGGCCATTCTCCAAGCAAAACTAGCCCTTGCAATGATTCTCCAACGATTTTCATTCCGGTTGGGGGCCACCTATCAACATGCACCAACGGTTGAGATGCTACTTTACCCTCAATACGGAGCACCCATAATTTTCAAGGGCCTACCCGATCATCAGGTGGTGCATCAAGATCAAGGGTCCTGA 1548 46.32 FFFFLLLKMVVLLWWRPRKIESHFSKQEIRGPPYRFFIGNVKELVGMMTTASSQPMPLSHNILPRVLPFFHHWRKIYGSTFLVWFGPNYRLAVSDPDLIREIFTSKAEFYEKNEAHPLIKQLEGDGLLSLKGEKWAHHRKLISPTFHMENLKLSMPVIAKSVVEMADKWSEMSDSGEVEIDVSKWFQTLTEDVITRTAFGSSYEDGKAIFKLQALQMEIVSQALQEVHIPGYRFLPTRTNWKSRKLDRKIKKSLSKLIDRRIEDSSSGKGLNPDKKGSKDLLGLMIQASNSSVSSTITVNDIVEECKTFFFASKQTTSNLLTWTVVLMAMHPLWQDLARDEVVTVCGSRDVPSKDNIIKLKTLSKILNESLRLYPPIVATIRRAKTDTELGGYKIPSGTEILIPIIAVHHDHAIWGNDANEFNPGRFSEGVARAANHPMGFFPFGLGVRTCIGQNLAILQAKLALAMILQRFSFRLGATYQHAPTVEMLLYPQYGAPIIFKGLPDHQVVHQDQGS 515
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3526355 3528845 + Bma000599.1 Bma01g00422 74939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00422 515 SUPERFAMILY Cytochrome P450 24 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00422 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Bma01g00422 515 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00422 515 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00422 515 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00422 515 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00422 515 Gene3D Cytochrome P450 13 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00422 515 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00422 515 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00422 515 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00422 515 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00422 515 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00422 515 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00422 515 Pfam Cytochrome P450 69 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00422 515 PANTHER CYTOCHROMEA2 5 498 - -
Bma01g00422 515 PANTHER CYTOCHROME P450 FAMILY MEMBER 5 498 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g00422 Bma11g00481 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00422 Bma-Chr1:3526355 Bma11g00481 Bma-Chr11:5971416 0 dispersed
Bma03g00403 Bma-Chr3:3050112 Bma01g00422 Bma-Chr1:3526355 1.66E-09 dispersed
Bma14g02072 Bma-Chr14:44088059 Bma01g00422 Bma-Chr1:3526355 2.25E-107 dispersed
Bma01g00422 Bma-Chr1:3526355 Bma07g01122 Bma-Chr7:44850186 2.24E-137 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00422 K15639 - pvy:116109884 791.571