Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00424 ATGGCTACCATATCGAGGGAAGATCACTCCGACGACTATGATAGTAGCTGCTCCTCCATCACCGTCCCGGACTCTAGCCGGAGCTGGATGAGCAACCTTAGCTTCGGCAGCCGACGGCTCAGCTCGGCCTCCTGCGAAGTTTCTCCTCACAAGCCACACAAGGCTAACCATGCCGCCTGGGAATCCATGAGATGGCTGAGGGGGGCTGCGGGATGCGTCGGGCTAGACCATTTTCGGCTGCTTCGCCGGCTCGGAAGTGGCGATATAGGAAATGTGTATCTTTGTCAGATAAGAAATCCATTGGTGGGTTTGCCTCAGAGCTTTTATGCCATGAAAGTGGTGGATAGAGAAGCTCTGGCTATAAGGAAGAAATTGAAAAGAGCAGAAATGGAGAAGGAGATTCTTGGTTTGCTTGATCATCCTTTTCTGCCTACTCTTTACGCCGCCTTTGAGGCTTCTCACTACTCTTGTTTGGTTATGGAGTTTTGTATTAATTGGAAAATTTGCAGGTTTTACGCAGCAGAAGTGATCTTAGCAATAGAATATCTGCACATGATGGGAATTGTTTACAGAGATTTAAAGCCTGAAAATGTACTAATCAGAGAAGACGGCCACATAATGTTGTCCGATTTCGATCTCTGTCTCAAATGCGATGTCGTTCCCAGGCTCGTCCGGCCAAGAAGAACAGCCAGTGAAGTCCGGTCCGCCGGTAAAGGTTCCGACAGAAGTTCTTCTTCTTCTTGCGTCGGTCCGTTAAAGCCAGTCTTGTCTTGCTTCTCAAAACGAACCAAACCAACAAAAACAACAACCATCATAGAGCAGGCTGATCATTTTCTTCTAGAGCCCGAACCAGAGTTAGTAGCAGAGCCAAGTGGGGCCCGCTCGAAATCTTTCGTCGGCACCCACGAATACCTAGCCCCGGAGATCATATCCGGCGAGGGCCACGGAAGTGCGGTCGATTGGTGGACATTAGGAGTGTTTTTATACGAAATGCTGTACGGAAAAACTCCGTTTAAAGGCGAAAACAACGAGAAAACCCTAGTAAACATTCTGAAGCAGCCATTGACGTTTCCAAGAATAGGAGTAAGTAGCAGCAAAGAGTACGAAGAAATGGTGAAAGTTCAAGATTTGATAATGAAACTGCTGGCGAAGAATCAGAAGAAGAGAATCGGAAGCGTAAAGGGTTCGACAGAAATCAAGAGGCATGAATTTTTCAAAGGAGTCAACTGGGCTTTGATTCGTTCCGTAAAACCACCTGAAATTCCTCGAGATTTGCAGAATATCAGACGGAGAAGCTACGTTCCAAAGCTGAGCAAGAAGGAGAGAGACGAACCTTACCAAATTCCTCACCACCATGTTGATTACTTCTAA 1371 46.97 MATISREDHSDDYDSSCSSITVPDSSRSWMSNLSFGSRRLSSASCEVSPHKPHKANHAAWESMRWLRGAAGCVGLDHFRLLRRLGSGDIGNVYLCQIRNPLVGLPQSFYAMKVVDREALAIRKKLKRAEMEKEILGLLDHPFLPTLYAAFEASHYSCLVMEFCINWKICRFYAAEVILAIEYLHMMGIVYRDLKPENVLIREDGHIMLSDFDLCLKCDVVPRLVRPRRTASEVRSAGKGSDRSSSSSCVGPLKPVLSCFSKRTKPTKTTTIIEQADHFLLEPEPELVAEPSGARSKSFVGTHEYLAPEIISGEGHGSAVDWWTLGVFLYEMLYGKTPFKGENNEKTLVNILKQPLTFPRIGVSSSKEYEEMVKVQDLIMKLLAKNQKKRIGSVKGSTEIKRHEFFKGVNWALIRSVKPPEIPRDLQNIRRRSYVPKLSKKERDEPYQIPHHHVDYF 456
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3538782 3540396 + Bma000601.1 Bma01g00424 74941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00424 456 SUPERFAMILY Protein kinase-like (PK-like) 58 427 IPR011009 -
Bma01g00424 456 Coils Coil 111 131 - -
Bma01g00424 456 MobiDBLite consensus disorder prediction 231 250 - -
Bma01g00424 456 ProSiteProfiles Protein kinase domain profile. 78 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00424 456 Pfam Protein kinase domain 79 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00424 456 Pfam Protein kinase domain 294 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00424 456 Gene3D Transferase(Phosphotransferase) domain 1 294 423 - -
Bma01g00424 456 PANTHER FLIPPASE KINASE 1-RELATED 1 456 - -
Bma01g00424 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Bma01g00424 456 Gene3D Phosphorylase Kinase; domain 1 70 167 - -
Bma01g00424 456 Gene3D Transferase(Phosphotransferase) domain 1 168 270 - -
Bma01g00424 456 PANTHER PROTEIN KINASE PINOID 2 1 456 - -
Bma01g00424 456 MobiDBLite consensus disorder prediction 236 250 - -
Bma01g00424 456 SMART serkin_6 78 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00424 Bma-Chr1:3538782 Bma13g00510 Bma-Chr13:9806958 2.12E-134 dispersed
Bma01g00424 Bma-Chr1:3538782 Bma14g00904 Bma-Chr14:10219310 3.06E-136 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66254 PF00069 Pkinase 1.60E-24 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00424 K08286 - qsu:112027986 672.544