Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00463 ATGATAGAATTTTTTTTTTTTTCCAAATTGTTTTTAATCTTCCACCCTGAAAAGTCTTATCATCTTTTCCACCTGCTGAGTTTTGACAGAAAGGGCCCGGCTTGGTCGACAATGGAAGCGGTGATCGGACTTCTACGCATTCGGGTGCTGCGAGGCGTCAACCTCGCCACCCGCGATTCTCGCAGCAGCGACCCTTATGCCACCATCACCACTGGTCAAATAACCTTGAAGACTCGTGTTGTGAAAAGTAATTGCAATCCCGAGTGGAATGATGAACTGACACTCCCCATCTCACATCTTGATGCTCCAATTACTCTCGTAAGCATATCCCTCTTCACTCTTTACGAATTTCGGTTAAAATTTGTGCAGAAAGTCTATGATAAAGACACTTTAACTGTAGACGACAAAATGGGCGAAGCCGAGATCGACATAAAACCATTCATCGAATGTCTGAAAATGCGGTTGGACAACCTTCCAAATGGCTGCGTTTTGAAGAGAGTTTACCCCGATCGAACAAATTGTTTGGCGGAGGAGAGCAGTTGCGTTTGGAATGACAGGAAAGTCGTGCAAAACATGTGTCTACGATTGAAGAACGTAGAGTGTGGTGAAGTGATGATTCAACTCGAGTGGATCGACATTCCGGGTGGAAAGGGTCTGGAAATCGACAAGAGGTCCTGCGACGCTAAATAA 690 45.07 MIEFFFFSKLFLIFHPEKSYHLFHLLSFDRKGPAWSTMEAVIGLLRIRVLRGVNLATRDSRSSDPYATITTGQITLKTRVVKSNCNPEWNDELTLPISHLDAPITLVSISLFTLYEFRLKFVQKVYDKDTLTVDDKMGEAEIDIKPFIECLKMRLDNLPNGCVLKRVYPDRTNCLAEESSCVWNDRKVVQNMCLRLKNVECGEVMIQLEWIDIPGGKGLEIDKRSCDAK 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3836620 3838383 + Bma000639.1 Bma01g00463 74980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00463 229 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 38 107 - -
Bma01g00463 229 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 115 217 - -
Bma01g00463 229 SMART C2_3c 44 156 IPR000008 -
Bma01g00463 229 ProSiteProfiles C2 domain profile. 26 160 IPR000008 -
Bma01g00463 229 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 38 107 IPR044562 -
Bma01g00463 229 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 115 217 IPR044562 -
Bma01g00463 229 Pfam C2 domain 43 146 IPR000008 -
Bma01g00463 229 Gene3D C2 domain 39 214 IPR035892 -
Bma01g00463 229 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 40 212 IPR035892 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00463 Bma-Chr1:3836620 Bma02g00511 Bma-Chr2:10166749 3.77E-69 dispersed
Bma01g00463 Bma-Chr1:3836620 Bma15g00044 Bma-Chr15:614208 2.06E-73 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00463 - - zju:107429323 262.692