Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00509 ATGGTGAACAGTATAATAACAGTCAATAACAACACAAACGATGCAGTCATCTGCTATGCGCCGACGATGATAACCACAAACGGCATTTGGCAAGGCGACAACCCTTTGGATTACTCCCTTCCCCTCTTCATTTTGCAATTATCACTCGTCGTCATTTTCACTCGCGTCCTCGTTTTCCTGCTCAAACCCTTCCGCCAACCTCGCGTCGTCTCTGAAATCTTGGGTGGAATAGTTTTGGGTCCTTCAGTTCTTGGACGGAGTACCACATTTGCCAACTCCATGTTTCCTCTGAGAAGTGTAATGGTGCTTGAAACAATGGCAAATGTGGGTCTTCTCTATTTTCTCTTCTTAGTCGGAGTGGAGATGGACCTGTCTGTAATTCGTCGAACTGGCCGGAAAGCCATGGCCATAGGCGCCGCGGGAATGGTTCTTCCCTTCATGATAGGAGGCTGCTTCTCCGTCGTCCTCCATAAAACAGATTACTCGATGAGCACAGGCACTTTCATTCTCTTCGTAGGCGTTTCCCTATCCGTCACTGCATTTCCTGTGCTCGCTAGAGTACTTGCAGAGCTAAAACTCATTAACACCGAGCTCGGAAGGGTTGCAATGGCGTCAGCGCTTTTCAATGACATGTGTGCCTGGATACTTCTGGCCATAGCCATTGCTCTTACGGAAAATCAAGATACTTCTTTAGCTTCAATTTGGACCATTTTATCGAGTCTTGGCTTTGTTACCTTCGCCATCTTGGCTGTTCGCCCCGCCATTGGGTGGATAATTAGACGGACGCCGGAGGGTGAACCGTTCAGTGACTTTCATATCTGTCTCGTTCTCACCGGCGTACTGATCTCAGGGTTTATTACGGACGCCATCGGAACCCATTCCATTTTTGGAGCTTTTGTGTTTGGTCTTGTTATTCCAAACGGACCGCTTGGGATTACTTTGATAGAGAAGCTTGAGGATTTTGTTTCAGGGCTTCTACTTCCTCTCTTCTTCGCCATTAGTGGGCTCAAGACTGATATTTCCGCGATTAAAGGACCTCAAACTTGGGGGATTCTACTTCTTCTCATTTTTTTTGCTGGTGCTGGTAAAATTGCAGGCACTCTTGTGGCTTCCCTTTGTTATCACATGCCTTGGAACGAAGGAATCTCTCTGGGTCTGCTCATGAACACCAAAGGCCTCATTGAGATGATCATCCTTAATGTCGGAAAAGACCACCAGGTGTTAGACGATAGGTCATTTGCAACAATGGTGATAGTGTCGCTGATAATGACTGCGCTAATAACCCCAATAGTGACTGTAATTTACAAGCCAGTAAGGAGGTTTACGCCCTACAAAAAGAGGACGATTCAGAGATCCAAACCGGATTCTGAGCTAAGGGTTTTGGTTTGTGTTCATACTCCCAGAAATGTTCCGCCAATCATTAATCTTCTCGAAGCGTCAAACCCAACAAAACGATCCCCCATTTGCATCTACGTACTCCACCTGGTCGAGCTCACCGGCCGTGCCTCCGCCATGCTCATCGTTCACAGCACCCACAAGTCGGGCCGCACCTCCCACAACTCCCAGGCGCAGTCGGACCACATCATCAACGCCTTCGAGAACTACGAGCAGCATGCTGGCTGCGTTTCGGTGCAGCCACTCACTGCCATTTCTCCCTACTCCACCATGCACGAAGACATCTGCAGCTTGGCCGAAGACAAGAGAGTCGCGTTCGTTATAATCCCGTTTCACAAGCAGCAGACGGTGGATGGGGGAATGGAAGTAGCTAACCCAGCTTTTCGAACGGTGAACCAGAATTTGCTGGCCAACGCACCTTGCTCCGTGGGGATTTTGGTGGACCGAGGGTTGAGTGGTTCGACTAGATTGGCTACTACGCAGGTCTCCCACAATGTTGCGGTTCTCTTCTTTGGGGGTCACGACGATAGAGAAGCTCTCTCGTACGCATGGCGGATGTCGGAGCATCCCGGAGTTAGCCTCAACGTGATGCGGTTCGTCCCCGGAAAAGACTCACATTCTGTCTCCAAGCCGAAGGAGATGAAGTCTGATGACCAGAGGCCCCTCCCGGTGGTTACAGGCGTGGAAAGACAAAAGCAACTGGACGACGCGCTGTTGAACGAGTTCAGGATGAAAACAGTGGGCAACAAGTCAGTTGTTTATAGCGAAAAAGTGGCGAATAATGGAGAAGAAACAGTGGCATCAGTAAGATCAATGGGCAACAATCATGATCTGTTCATAGTTGGGAGAGGGCAAGGGACGGTGTCGCCGCTCACGGCCGGGCTGACCGACTGGAGCGAGTGCCCGGAGCTGGGGGCCATTGGAGACCTCCTTGCGGCCTCCGATTTTTCATCCACCGCTTCGGTGTTGGTGGTGCAGCAATACGTCGGAGAAGATCCACACGGGGACGGAGTAGGGACGGTTGATAGCCCTACCGGCCGAGTTGAGGAGCACATGACCCACGCATGGCAAATGAGGGTGAGACCTCAGCCACCGGCAGGGCCTCACCCTGTCTTCTCCTATTAG 2520 50.6 MVNSIITVNNNTNDAVICYAPTMITTNGIWQGDNPLDYSLPLFILQLSLVVIFTRVLVFLLKPFRQPRVVSEILGGIVLGPSVLGRSTTFANSMFPLRSVMVLETMANVGLLYFLFLVGVEMDLSVIRRTGRKAMAIGAAGMVLPFMIGGCFSVVLHKTDYSMSTGTFILFVGVSLSVTAFPVLARVLAELKLINTELGRVAMASALFNDMCAWILLAIAIALTENQDTSLASIWTILSSLGFVTFAILAVRPAIGWIIRRTPEGEPFSDFHICLVLTGVLISGFITDAIGTHSIFGAFVFGLVIPNGPLGITLIEKLEDFVSGLLLPLFFAISGLKTDISAIKGPQTWGILLLLIFFAGAGKIAGTLVASLCYHMPWNEGISLGLLMNTKGLIEMIILNVGKDHQVLDDRSFATMVIVSLIMTALITPIVTVIYKPVRRFTPYKKRTIQRSKPDSELRVLVCVHTPRNVPPIINLLEASNPTKRSPICIYVLHLVELTGRASAMLIVHSTHKSGRTSHNSQAQSDHIINAFENYEQHAGCVSVQPLTAISPYSTMHEDICSLAEDKRVAFVIIPFHKQQTVDGGMEVANPAFRTVNQNLLANAPCSVGILVDRGLSGSTRLATTQVSHNVAVLFFGGHDDREALSYAWRMSEHPGVSLNVMRFVPGKDSHSVSKPKEMKSDDQRPLPVVTGVERQKQLDDALLNEFRMKTVGNKSVVYSEKVANNGEETVASVRSMGNNHDLFIVGRGQGTVSPLTAGLTDWSECPELGAIGDLLAASDFSSTASVLVVQQYVGEDPHGDGVGTVDSPTGRVEEHMTHAWQMRVRPQPPAGPHPVFSY 839
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4189789 4192551 - Bma000688.1 Bma01g00509 75026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00509 839 Gene3D - 479 761 - -
Bma01g00509 839 PANTHER CATION/H + ANTIPORTER 9 827 - -
Bma01g00509 839 Pfam Sodium/hydrogen exchanger family 50 432 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bma01g00509 839 Gene3D - 42 441 IPR038770 -
Bma01g00509 839 PANTHER CATION/H(+) ANTIPORTER 15 9 827 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00509 Bma-Chr1:4189789 Bma12g00055 Bma-Chr12:1109001 0 dispersed
Bma07g00982 Bma-Chr7:37931621 Bma01g00509 Bma-Chr1:4189789 2.98E-122 dispersed
Bma07g01585 Bma-Chr7:51141633 Bma01g00509 Bma-Chr1:4189789 2.26E-168 dispersed
Bma08g01032 Bma-Chr8:49468348 Bma01g00509 Bma-Chr1:4189789 1.80E-163 dispersed
Bma08g01037 Bma-Chr8:49500249 Bma01g00509 Bma-Chr1:4189789 8.02E-179 dispersed
Bma14g01993 Bma-Chr14:43240494 Bma01g00509 Bma-Chr1:4189789 5.89E-157 dispersed
Bma01g00509 Bma-Chr1:4189789 Bma04g00738 Bma-Chr4:7730755 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00509 - - pvy:116140351 1225.31