Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00517 ATGTCAATGCGTCTCGCTTTTGTTATTCTTCTGTCTTTTTTCCCATTCGATTTATTTGAATTAATGCTGTTTTTCCCTCTCTTTTTGCATGGTAAACAGTCTTACATCGTGTACATGGGATCGCATTCGCATGGATCAGATGTTTTAGAATCTCAACTTAATGCAGTCACTGATTCTCACAATCTGTTCCTTGCATCATTCGTGGGAAGCGAAGAGATCGCGAAAGACGCCATCTTTTATTCGTATAAAAGGCACATAAACGGGTTTGCTGCAGTTCTAGACGAGGAGCAGGCAGCAGAGATTGCAAAGGACCCGAAAGTCATTTCAGTTTTCGAGAACAAAGGCAGAAGACTGCAAACGACGCATTCATGGGACTTCTTGAAACTGGAAAAGGAAGGCGTAGTTCGCCATAGCTCTCTTTGGAAGAGAGCCAATTATGGAGAGGACGTAATTATAGCAACCTTAGACACTGGGGTGTGGCCGGAGTCAGAGAGCTTTAACGACGATGGTTTTGGACCCGTTCCGTCCAGGTGGAAGGGGATCTGCCAGAACAACACCAAGGAAGGAGTGCCATGCAACAAGAAACTGATTGGAGCGAGGTACTTCAACAAGGGATACCAGGCCTACGCAAAGCTCCCCGAATATATGAACACAGCGAGGGACTACGAAGGCCATGGTTCCCACACGCTCTCCACGGCTGGAGGCAGCTTCGTGGCTGGTGCGAATGTGAATGGGGTCGGCAATGGCACGGCCAAAGGTGGCTCACCAAGAGCCAGAGTAGCTGCTTATAAGATTTGCTGGCCCCAAGTCGTTACCGGCGAATGCTTCGACGCTGATATCTTGGAAGGCATCGATTTTGCCATACAAGACGGAGTCGACATTCTTTCGGTGTCGGTCGGTGGCGTAGCAGGCGATTACTTCCAGGACGGGATATCCATCGGTGCATTTCACGCTGTCAAGAATGGTATCACTTTCGTAGCCTCCGCCGGAAACTCTGGACCCGCACTCGGAACTGTGTCCAACGTATCTCCATGGATGTTAACTGTTGGGGCCAGCACTTTAGACCGCGAGTTTGAAGCTTATGTGAATCTCAAAAATGGCCTCCGTTTGAAGGGTAAGAGCCTCACCGGAGCTTTACCGAAGCATAAATTCTACCCGCTAATCAGTGGCGCGCTGGCTAAAGCTGCAAACGCAACTGAGGAAGACGCCCTGCTGTGCAAGGAAGGAACACTTGACCGCTCGAAAGCGGAGGGGAAAATAGTGGTCTGCCTGAGGGGGGATATAGGTAGAGTGGAGAAGGGATTGTATGCATTCCAGGCCGGCGCAGCTGGGATGATACTTTGCAACGACGAACTTTCCGGTAACGAGCTTATAGCCGACCCTCACTTCTTACCTGCATCTCACATTAACTATACCGCCGGCGTCGAATTGTTTTCTTACATCAATTCCACCAGGTCCCCCATGGGATATCTTGAGCCAGCAGTAGGACGAATCCACACACAGCCTGCTCCGTTCATGGCAGCTTTCTCCTCCAGAGGACCAAACACAGTCACCCCCGAGATCCTCAAGCCTGATGTGACTGCTCCTGGAGTGGATATAATAGCTGCTTACACCGGAGCAAAGAGTCCGACAGAGCAACCCTTTGACAAGCGCAGAACTGCTTTCATCACCATGTCCGGAACCTCCATGTCCTGCCCTCATGTTTCTGGAGTTGTCGGCCTTCTCAAGGCCCTCTATCCCCAGTGGTCTCCGTCTGCAATTAAATCTGCAATCATGACTACGTCCGTAACGAGGGATAACACCGCCCATGCAATGCAAGATGAGAGTCAAGGAAAGGCAACCCCATTTCACCACGGCGCTGGCCACATACGACCCAACCGCGCCGCCGATCCTGGGCTGGTCTATGACCTGACCACCGAGGACTACATAAACTTCCTCTGCGCCTCTGGATATAACCATACCGTTATTCAGATCTTCGCCGACGTTCCATTCCTGTGCCCCAAAAATGCGAGCCTCCTCGACTTCAACTACCCTTCCATTACTGTGCCGAATCTCTCCGGCAAGGTCACCGTCACCAGAAAAGTGAAGAACGTTGGCAGCCCGGGAGTGTACGAAGCCCGCATCCGTGATCCGAAGGGAATAGCGGTGAGCGTGGAGCCAAAGGTTTTGAAGTTCGAGAAAGAGGGGGAGGAGAAGAGCTTCCAGGTGACATTGGAGGTCAAGAATGCTGCTTTGGCTAAAAACTATGCATTCGGAAGGCTAATCTGGACAGACGGCACCCACCACGTCAGAAGTCCGATCGTAGTTTCGACTTCGCCGCCGCTACCTCGTCACTGA 2337 51.26 MSMRLAFVILLSFFPFDLFELMLFFPLFLHGKQSYIVYMGSHSHGSDVLESQLNAVTDSHNLFLASFVGSEEIAKDAIFYSYKRHINGFAAVLDEEQAAEIAKDPKVISVFENKGRRLQTTHSWDFLKLEKEGVVRHSSLWKRANYGEDVIIATLDTGVWPESESFNDDGFGPVPSRWKGICQNNTKEGVPCNKKLIGARYFNKGYQAYAKLPEYMNTARDYEGHGSHTLSTAGGSFVAGANVNGVGNGTAKGGSPRARVAAYKICWPQVVTGECFDADILEGIDFAIQDGVDILSVSVGGVAGDYFQDGISIGAFHAVKNGITFVASAGNSGPALGTVSNVSPWMLTVGASTLDREFEAYVNLKNGLRLKGKSLTGALPKHKFYPLISGALAKAANATEEDALLCKEGTLDRSKAEGKIVVCLRGDIGRVEKGLYAFQAGAAGMILCNDELSGNELIADPHFLPASHINYTAGVELFSYINSTRSPMGYLEPAVGRIHTQPAPFMAAFSSRGPNTVTPEILKPDVTAPGVDIIAAYTGAKSPTEQPFDKRRTAFITMSGTSMSCPHVSGVVGLLKALYPQWSPSAIKSAIMTTSVTRDNTAHAMQDESQGKATPFHHGAGHIRPNRAADPGLVYDLTTEDYINFLCASGYNHTVIQIFADVPFLCPKNASLLDFNYPSITVPNLSGKVTVTRKVKNVGSPGVYEARIRDPKGIAVSVEPKVLKFEKEGEEKSFQVTLEVKNAALAKNYAFGRLIWTDGTHHVRSPIVVSTSPPLPRH 778
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4273885 4276950 - Bma000696.1 Bma01g00517 75034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00517 778 Pfam Subtilase family 147 611 IPR000209 GO:0006508|GO:0008236
Bma01g00517 778 PANTHER BNAC02G33520D PROTEIN 26 771 - -
Bma01g00517 778 SUPERFAMILY Protease propeptides/inhibitors 33 114 - -
Bma01g00517 778 Pfam PA domain 404 477 IPR003137 -
Bma01g00517 778 SUPERFAMILY Subtilisin-like 118 633 IPR036852 GO:0004252|GO:0006508
Bma01g00517 778 PANTHER PEPTIDASE S8 26 771 - -
Bma01g00517 778 CDD Peptidases_S8_3 118 596 IPR034197 -
Bma01g00517 778 ProSitePatterns Serine proteases, subtilase family, serine active site. 560 570 IPR023828 -
Bma01g00517 778 ProSiteProfiles Serine proteases, subtilase domain profile. 123 629 - -
Bma01g00517 778 SUPERFAMILY PA domain 413 484 IPR046450 -
Bma01g00517 778 Pfam Peptidase inhibitor I9 34 118 IPR010259 -
Bma01g00517 778 Gene3D - 646 772 - -
Bma01g00517 778 Pfam Fibronectin type-III domain 674 769 IPR041469 -
Bma01g00517 778 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 29 119 IPR037045 -
Bma01g00517 778 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Bma01g00517 778 PRINTS Subtilisin serine protease family (S8) signature 559 575 IPR015500 -
Bma01g00517 778 PRINTS Subtilisin serine protease family (S8) signature 147 166 IPR015500 -
Bma01g00517 778 CDD PA_subtilisin_like 361 491 - -
Bma01g00517 778 Gene3D - 355 499 - -
Bma01g00517 778 Gene3D Peptidase S8/S53 domain 149 642 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00517 Bma-Chr1:4273885 Bma14g00928 Bma-Chr14:10461748 0 dispersed
Bma10g00101 Bma-Chr10:974295 Bma01g00517 Bma-Chr1:4273885 6.97E-166 dispersed
Bma01g00517 Bma-Chr1:4273885 Bma08g00694 Bma-Chr8:42238206 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00517 - - jre:108996490 1004.97