Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00537 ATGATCAGGAAGAAAAATGTGGATATTCGATTCTGCGAAGCTGAATGTTACAAGATCGATGCAGAAAACAAGAAAATCTTTTGTAGATCTAATCAAACCAACAATCTGAATGGGAAAAAAGAATTTGTAATGGACTACGACTTCCTCGTAATATCTGTCGGAGCACAGGTTAATACGTTCAACACTCCTGGTGTGGTGGAGAATTGTCATTTCTTGAAGGAAGTGGAAGATGCTCAAAGAATTCGAAGGACTGTTATCGACTGTTTTGAGAGGGCGAGTTTACCGACATTAGCAGATGATGAACGATCAAGAATTCTTCACTTTGCTGTTGTTGGTGGTGGCCCCACTGGTGTAGAATTTGCTGCGGAGCTTCATGATTTTGTCAACGAGGATTTAACCAAATTATATCCTGGAGTTAAAGAACTAGTAAAAATAACTCTTCTTGAGGCTGGAGATCATATTTTGAACATGTTTGACAAAAGAATTACAGCTTTTGCTGAAGAAAAATTTCAAAGGGATGGTATCGATGTCAGAACAGGATCAATGGTTGTCAAAGTAACTGATAAAGAAATTTCTACTAAAGAAATGAAAAATGGAGAGATTTCTTCTATACCTTATGGAATGGTTGTATGGTCAACTGGGATTGGGACTCGCCCCTTCATCAGAGACTTTATGGCACAGATTGGTCAGACTAACCGGCGTGCTTTGGCGACTGATGAATGGCTGCGAGTCGAAGGATGCAGTAACGTGTATGCACTTGGTGACTGTGCCACAATAAACCAGCGTAAAGTCATGGAAGATATTTCTTCGATCTTTGGCAAAGCGGACAAGGACAATTCGGGAACACTTACAGTCAAAGAATTTCAAGAAGTCATCGATGATGTGTGTGAGAGGTATCCTCAGGTGGAGCTTTATTTAAAGAATAAGCAGATGGGAAACATAGCTGATCTTTTGAAGGAGTCCAAAGGGAATGTTGCGAAGGAATCCATTGAATTGAACATTGAAGAATTTAAATCAACTCTTTCCCAGGTGGATTCACAAATGAAGAATCTTCCGGCAACTGCACAGGTGGCAGCTCAGCAAGGTGTTTATCTTGCTAAATGTTTTAACCGTATGGAAGAGTGTGAAAAGTATCCAGAGGGTCCTCTCAGATTCAGGGAATCAGGCCGCCATCGATTTCATCCCTTTCGGTATAAGCATCTGGGACAGTTTGCGCCATTGGGTGGAGAGCAAACAGCTGCTCAACTTCCTGGAGATTGGGTGTCCATTGGCCATAGCAGCCAGTGGCTTTGGTATTCTGTTTATGCAAGCAAGCAAGTCAGTTGGAGGACGAGGGCATTGGTGGTATCAGATTGGGGAAGGCGTTTTATCTTCGGAAGAGATTCTAGTCGCATCTGA 1398 41.99 MIRKKNVDIRFCEAECYKIDAENKKIFCRSNQTNNLNGKKEFVMDYDFLVISVGAQVNTFNTPGVVENCHFLKEVEDAQRIRRTVIDCFERASLPTLADDERSRILHFAVVGGGPTGVEFAAELHDFVNEDLTKLYPGVKELVKITLLEAGDHILNMFDKRITAFAEEKFQRDGIDVRTGSMVVKVTDKEISTKEMKNGEISSIPYGMVVWSTGIGTRPFIRDFMAQIGQTNRRALATDEWLRVEGCSNVYALGDCATINQRKVMEDISSIFGKADKDNSGTLTVKEFQEVIDDVCERYPQVELYLKNKQMGNIADLLKESKGNVAKESIELNIEEFKSTLSQVDSQMKNLPATAQVAAQQGVYLAKCFNRMEECEKYPEGPLRFRESGRHRFHPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTRALVVSDWGRRFIFGRDSSRI 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4610185 4613823 - Bma000724.1 Bma01g00537 75054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00537 465 ProSitePatterns EF-hand calcium-binding domain. 276 288 IPR018247 -
Bma01g00537 465 SUPERFAMILY FAD/NAD(P)-binding domain 107 260 IPR036188 -
Bma01g00537 465 ProSiteProfiles EF-hand calcium-binding domain profile. 263 298 IPR002048 GO:0005509
Bma01g00537 465 Pfam Pyridine nucleotide-disulphide oxidoreductase 4 265 IPR023753 GO:0016491
Bma01g00537 465 Gene3D - 307 464 - -
Bma01g00537 465 Gene3D - 1 290 - -
Bma01g00537 465 SUPERFAMILY EF-hand 218 351 IPR011992 -
Bma01g00537 465 PRINTS FAD-dependent pyridine nucleotide reductase signature 107 125 - -
Bma01g00537 465 PRINTS FAD-dependent pyridine nucleotide reductase signature 235 257 - -
Bma01g00537 465 PRINTS FAD-dependent pyridine nucleotide reductase signature 46 64 - -
Bma01g00537 465 PANTHER NAD(P)H DEHYDROGENASE B2 2 465 - -
Bma01g00537 465 PANTHER NADH DEHYDROGENASE 2 465 IPR045024 GO:0003954|GO:0006116
Bma01g00537 465 SUPERFAMILY FAD/NAD(P)-binding domain 4 159 IPR036188 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00537 Bma-Chr1:4610185 Bma11g00076 Bma-Chr11:852278 1.76E-12 dispersed
Bma02g01353 Bma-Chr2:55967614 Bma01g00537 Bma-Chr1:4610185 0 transposed
Bma14g01501 Bma-Chr14:30273585 Bma01g00537 Bma-Chr1:4610185 8.12E-06 transposed
Bma01g00537 Bma-Chr1:4610185 Bma07g00356 Bma-Chr7:4477954 7.01E-14 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00537 K03885 - csv:101204145 858.211