Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00558 TCCTCACTTGTTTTTCTCTCACTGCTACTCCTTTTTCTCTCATCAAAAACACCTTCAGCCGCGAGAAACACCTCGCGCCGCCATGGCCAACTCTCTATCAACTATTATAACAAAACGTGCCCTCAAGTTGACCAACTCGTGGCCTCCATTACAACCGAGCTGTTCAAAGAAGCTCCAGTGTCTGGCCCTGCAACTCTTCGTCTCTTCTTCCATGATTGCTTTGTCGAAGGTTGTGATGGATCGATTCTGATATCGTCGAATCCAGCCAAAAAAGTGTTGGCTGAGAAGGACGCGGACGATAATAAGGATTTGAGGGAAGAGGGATTCGAGGTTGTGAAGAAGGCAAAGGCTATGGTTGAAAGCAAGTGCCCTGGTATTGTGTCTTGCGCAGACATTCTTGCAATTGCAGCCAGAGATTATGTCCACTTGGCAGGAGGACCTTATTACGAGGTGAAGAAAGGAAGGTGGGATGGTAAATTATCAATGGCATCAAGAGTAACCTCCAACCTCCCTCGAGCGAATTCGACAGTTGATTTTCTGCTCAAACTCTTCCTCTCCAAAGGCCTAACCGCCTCTGACCTAGTCGTCCTCTCTGGTGCACACACCATCGGTTTTGCCCACTGTGACCACTTCATCCCTCGTTTATATGATTACCAAGGTAAAAAGCAACCAGATCCAACCATTGACTCGAGGCTCTTGAAGGCTCTCAAGATGTCGTGTCCTTTTTCTGGTGGAAACACTGATATTGTTGTTCCGTTTGATGTTACCACACCATTTTTGTTCGACCATGCTTATTATGCTAATTTGGAAGGAAAATTAGGGTTGCTAGTAACTGATCAGGCTTTGTTTATGGATGCAAGAACCAAGCCTATTGTTGAAGCTATGGCTAAGGATAATCAGAAGTTTTTCCAAGCTTTTATCGTGGCTATGGAGAAGATGGGATCCATTGGAGTGAAGAGAGGAAGAAGACATGGAGAGAGAAGGATAGATTGTAGCATTCACAAAGAATAA 1011 45.1 SSLVFLSLLLLFLSSKTPSAARNTSRRHGQLSINYYNKTCPQVDQLVASITTELFKEAPVSGPATLRLFFHDCFVEGCDGSILISSNPAKKVLAEKDADDNKDLREEGFEVVKKAKAMVESKCPGIVSCADILAIAARDYVHLAGGPYYEVKKGRWDGKLSMASRVTSNLPRANSTVDFLLKLFLSKGLTASDLVVLSGAHTIGFAHCDHFIPRLYDYQGKKQPDPTIDSRLLKALKMSCPFSGGNTDIVVPFDVTTPFLFDHAYYANLEGKLGLLVTDQALFMDARTKPIVEAMAKDNQKFFQAFIVAMEKMGSIGVKRGRRHGERRIDCSIHKE 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4896111 4897539 + Bma000746.1 Bma01g00558 75075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00558 336 PRINTS Plant peroxidase signature 308 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma01g00558 336 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma01g00558 336 PRINTS Plant peroxidase signature 252 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma01g00558 336 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma01g00558 336 PRINTS Plant peroxidase signature 268 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma01g00558 336 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma01g00558 336 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma01g00558 336 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma01g00558 336 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma01g00558 336 Gene3D - 34 332 - -
Bma01g00558 336 Gene3D Peroxidase, domain 2 171 313 - -
Bma01g00558 336 PANTHER PEROXIDASE 25-RELATED 22 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma01g00558 336 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Bma01g00558 336 PANTHER PEROXIDASE 19 22 331 - -
Bma01g00558 336 CDD secretory_peroxidase 30 332 IPR033905 GO:0004601|GO:0042744
Bma01g00558 336 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Bma01g00558 336 ProSiteProfiles Plant heme peroxidase family profile. 30 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma01g00558 336 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma01g00558 336 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma01g00558 336 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma01g00558 336 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma01g00558 336 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma01g00558 336 Pfam Peroxidase 50 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma01g00558 336 SUPERFAMILY Heme-dependent peroxidases 30 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00558 Bma-Chr1:4896111 Bma01g01433 Bma-Chr1:24364086 4.43E-73 dispersed
Bma03g01137 Bma-Chr3:15128214 Bma01g00558 Bma-Chr1:4896111 1.96E-87 transposed
Bma04g01699 Bma-Chr4:53246172 Bma01g00558 Bma-Chr1:4896111 2.15E-93 transposed
Bma08g00182 Bma-Chr8:2227738 Bma01g00558 Bma-Chr1:4896111 2.81E-91 transposed
Bma09g00008 Bma-Chr9:303810 Bma01g00558 Bma-Chr1:4896111 4.86E-90 transposed
Bma13g00585 Bma-Chr13:12757631 Bma01g00558 Bma-Chr1:4896111 1.91E-93 transposed
Bma01g00558 Bma-Chr1:4896111 Bma14g01008 Bma-Chr14:11711893 4.32E-165 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00558 K00430 - csv:101216263 517.309