Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma01g00565 | TCCGATCATTCCTCTATTGTGTCCATGAATTTATTTGTGGCGCTACTTTGTGGTTGTATTGTGATTGGTCATCTTCTCGAGGAGAATCGCTGGATGAATGAGTCAATTACGGCTCTACTGATTGGACTAAGCACTGGAGTCGTCATTCTGCTCATTAGTGGGGGGAAAAATTCACATTTACTAGTCTTCAGTGAAGATCTTTTCTTTATATATCTTCTGCCACCTATTATATTCAATGCCGGGTTCCAGGTGAAAAAGAAGCAGTTTTTCAGAAACTTTAGTACAATTATGCTCTTTGGGGCAATTGGCACATTAATCTCTTGTTGCGTCATTTCATTAGGTGTTATACAATTTTTTAAGAAATTGGATATCGGATCACTGGACATTGGAGATTATTTAGCAATTGGTGCAATTTTTGCTGCTACGGATTCTGTATGCACATTGCAGATTTTGAATCAGGATGAGACACCTTTACTCTACAGTCTTGTATTTGGAGAAGGTGTGGTAAATGATGCTACATCAGTGGTGCTATTTAATGCAATCCAGAGCTTTGATCTCTCCCATATTGATTCCTGGAATGCATTACAATTTATTGGCAGCTTCTTTTACTTATTTTTTACAAGCACTGTTCTGGGTGTGATGGTGAGTGTTATTATATCTTTCTATCTCGTGAGTGCAAACGTTTTCATTTTTTATGAATTCAGGCATTCTACAGATCGCGAGGTTGCTTTAATGATATTAATGGCATACCTTTCATATATGATGGCTGAATTGTTCTATTTAAGTGGCATTCTCACTGTGTTCTTTTGCGGGATCGTGATGTCACATTACACCTGGCACAATGTCACTGAAAGTTCCCGAGTTACCACAAAGCATGCTTTTGCTACGTTGTCATTTGTAGCTGAGATCTTTATCTTCCTTTACGTTGGCATGGACGCATTGGACATTGAAAAGTGGAGATTTGTCGGCGACAGTCCTGGGACTTCTTTGGCAGTAAGTTCCATACTTTTAGCTCTGGTTATGGCTGGCAGAGCTGCTTTTGTTTTTCCATTATCATTTTTGTCCAACTTAGCAAAAAAATCACCCGCTGAGAAAATTAGCTTCAGGCAGCAAGTGATAATATGGTGGGCTGGTCTCATGAGAGGTGCCGTCTCAATGGCTCTTGCTTATAATCAGTTCACAAGATCAGGACACACTCAATTGCGTGGGAATGCAATCATGATCACAAGCACTATAACAGTCGTTCTCTTCAGCACAGTGTTGTTTGGGTTAATGACCAAGCCTCTCATTAGGTTCTTGTTGCCTAATCCGAAACCCACATCAAGCATGGTTTTGTCCGATCCATCCACTCCCAAATCATTTATCATTCCGCTTCTCGGAGGCAGTCAAGACTCCGAAGTCGATACCAGGGCCCAAGAAATTCCCCGTCCGAGCAGTATTCGAGCCCTTCTAACCACTCCAACACACAATGTTCATCGGTACTGGCGTAAATTTGACGATGCATTTATGCGGCCGGTTTTTGGCGGACGGGGTTTTGTTCCCTATGTGCCTGGTTCGCCAACAGAGAGGAGTTCCAACCAATGGCAG | 1587 | 41.78 | SDHSSIVSMNLFVALLCGCIVIGHLLEENRWMNESITALLIGLSTGVVILLISGGKNSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFSTIMLFGAIGTLISCCVISLGVIQFFKKLDIGSLDIGDYLAIGAIFAATDSVCTLQILNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLSHIDSWNALQFIGSFFYLFFTSTVLGVMVSVIISFYLVSANVFIFYEFRHSTDREVALMILMAYLSYMMAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAEIFIFLYVGMDALDIEKWRFVGDSPGTSLAVSSILLALVMAGRAAFVFPLSFLSNLAKKSPAEKISFRQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRGNAIMITSTITVVLFSTVLFGLMTKPLIRFLLPNPKPTSSMVLSDPSTPKSFIIPLLGGSQDSEVDTRAQEIPRPSSIRALLTTPTHNVHRYWRKFDDAFMRPVFGGRGFVPYVPGSPTERSSNQWQ | 529 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 5067918 | 5072820 | + | Bma030189 | Bma01g00565 | 75082 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma01g00565 | 529 | PRINTS | Na+/H+ exchanger signature | 81 | 95 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Bma01g00565 | 529 | PRINTS | Na+/H+ exchanger signature | 96 | 104 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Bma01g00565 | 529 | PRINTS | Na+/H+ exchanger signature | 67 | 78 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Bma01g00565 | 529 | PRINTS | Na+/H+ exchanger signature | 136 | 146 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Bma01g00565 | 529 | Pfam | Sodium/hydrogen exchanger family | 11 | 430 | IPR006153 | GO:0006812|GO:0015299|GO:0016021|GO:0055085 | |
Bma01g00565 | 529 | PANTHER | SODIUM/HYDROGEN EXCHANGER 2 | 1 | 528 | - | - | |
Bma01g00565 | 529 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 1 | 528 | IPR018422 | GO:0006812|GO:0015299|GO:0016021 | |
Bma01g00565 | 529 | Gene3D | - | 129 | 180 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g00565 | Bma-Chr1:5067918 | Bma05g01064 | Bma-Chr5:49333712 | 0 | dispersed | |
Bma11g00963 | Bma-Chr11:42949747 | Bma01g00565 | Bma-Chr1:5067918 | 1.50E-35 | transposed | |
Bma14g00316 | Bma-Chr14:3944965 | Bma01g00565 | Bma-Chr1:5067918 | 0 | transposed | |
Bma01g00565 | Bma-Chr1:5067918 | Bma05g00316 | Bma-Chr5:9974003 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma01g00565 | - | - | twl:120011273 | 875.544 |