Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00575 TTCATGGCTGGGAGCATTGAAGTCAATCTCAATGAATCCAGGATGGTGGTTCCTTTGAACACATGGGTACTCATATCCAACTTCAAGTTAGCCTACAAATTCCTCCGTCGTCCGGATGGCACTTTCAACCGTCACTTGGCTGAATTTCTTGACCGAAAAGTTCCAGCCAATGCCAACCCTGTTGATGGGGTGATCTCCTTTGATGTGATTATTGATCGCAGTAGAAACCTCCTCAGTAGAATTTACAGACCAGCAAATGCAGAAGAGCCTCAGATAAACCTTGCTGATCTTGAGAAGCCAGTGGGCTCTGCGTTTGTTCCTGTTATAGTCTTCTTTCATGGTGGAAGTTTTGCACACTCCTCTGCAAATACTGCCATTTACGACACTCTGTGTCGCAGATTAGTTGGAATTTGTGAGGCAGTGGTTATTTCTGTTAGCTATCGTCGAGCTCCAGAAAATAGATACCCTTGTGCCTATGATGATGGATGGACAGCTCTCAAGTGGGTTAGTTCAAGACCATGGCTTCAAAGTAAAGACTCAAAAGCTCATATCTATTTGGCCGGTGATAGTTCTGGTGGAAATATTGTGCATAATGTTGCTCTACGAGCTATAGAATCCGGCATTGAAGTACTGGGGAATATTCTTCTCAATCCGATGTTCGGTGGGCAAGAAAGAACGGAGTCAGAAACGCGATTGGATGGGAAATATTTCGTTACGATCCAAGATCGAGATTGGTATTGGAGAGCGTTTCTCCCTGAAGGGGAAGATCGCGACCATCCGGCCTGTAATCCTTTTGGCCCGAAGGGAAGAAACCTTAAAGGAATCAAATTCCCCAAGAGCCTTGTGGTAGTGGCTGGTCTAGATCTCACTCAAGATTGGCAATTGGCTTATGCGGAAGGGCTCGAACAGGCCGGACACAAGGTGAAACTTCTTTATCTTGAACAAGCAACAGTCGGGTTTTACCTCCTACCAAATAATGATCACTTCTACACCGTTATGGATGAGATAAGTGATTTCGTATGTTTTTAG 1029 44.8 FMAGSIEVNLNESRMVVPLNTWVLISNFKLAYKFLRRPDGTFNRHLAEFLDRKVPANANPVDGVISFDVIIDRSRNLLSRIYRPANAEEPQINLADLEKPVGSAFVPVIVFFHGGSFAHSSANTAIYDTLCRRLVGICEAVVISVSYRRAPENRYPCAYDDGWTALKWVSSRPWLQSKDSKAHIYLAGDSSGGNIVHNVALRAIESGIEVLGNILLNPMFGGQERTESETRLDGKYFVTIQDRDWYWRAFLPEGEDRDHPACNPFGPKGRNLKGIKFPKSLVVVAGLDLTQDWQLAYAEGLEQAGHKVKLLYLEQATVGFYLLPNNDHFYTVMDEISDFVCF 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5166386 5167841 + Bma000766.1 Bma01g00575 75092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00575 342 Pfam alpha/beta hydrolase fold 109 321 IPR013094 GO:0016787
Bma01g00575 342 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Bma01g00575 342 SUPERFAMILY alpha/beta-Hydrolases 48 340 IPR029058 -
Bma01g00575 342 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 109 125 IPR002168 GO:0016787
Bma01g00575 342 PANTHER GIBBERELLIN RECEPTOR GID1C 4 340 - -
Bma01g00575 342 Gene3D alpha/beta hydrolase 1 341 IPR029058 -
Bma01g00575 342 PANTHER ARYLACETAMIDE DEACETYLASE 4 340 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g00575 Bma05g00305 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00575 Bma-Chr1:5166386 Bma05g00301 Bma-Chr5:9232162 0 dispersed
Bma02g00380 Bma-Chr2:5939948 Bma01g00575 Bma-Chr1:5166386 6.00E-15 dispersed
Bma01g00575 Bma-Chr1:5166386 Bma10g01037 Bma-Chr10:28158184 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00575 K14493 - jre:118349271 606.29