Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00606 GAAACTATAGAAATGACCAACAAGCTTTCTGACGAACTAACCCAGAAAACAGGCGTTTTTGGTCTCATGGTATGGGAAGTCATCGGGATTGCTGTCGGGTTGTTCATTGTAGTTATCCTATCCATTCTATCATTATGTCTCACTTCCAGAAAAAGGTCGAGGAGAGGTAGGGACGAGGTAACTCAGAGTCAAATCCCAACTGTCTCGAAGGAGATCAAAGAGGTTAGAGTGGAGCAATTATCAGCAGCTGAATTTGTTCCTCGCGACGGAATTCTTCTAACCATTCATGACAAATCGAGTGAAAAAGGTTCAGACAAGGTTATGGTACACCTTGATGTGGGGAAGATGAAGAATGGAGATAATAGCAGTCAGTCCGGCTCATTTCATCAGTTTGATAAAGATGGAGCTGGATCTCAATCAGGAGACGAAGGGAGTTCTGGCAAGATTACCATATACAGACCTTCTTCTTCTTCTTCATATCCGTTGACCGCTCCTTCCCCACTTTCCGGCCTGCCTGAATTTTCTCACTTGGGTTGGGGCCACTGGTTTACCCTCAGAGATCTCGAGGTGGCCACCAATCGATTCTCCAAAGAAAATGTGCTTGGAGAGGGTGGCTATGGAGTTGTTTATCGGGGGCGTCTAGTCAACGGAACTCCGGTGGCTGTTAAAAGGATTCTCAATAATCTGGGTCAGGCAGAGAAAGAATTTAGAGTGGAAGTTGAAGCCATTGGTCACGTCCGCCATAAGAATTTGGTTCGTCTTCTTGGATACTGCATGGAAGGGACTCATAGAATGCTGGTTTATGAGTATGTGAACAATGGAAACTTAGAGCAATGGCTTCATGGAGCTATGCGTCAGCATGGGTACCTTACCTGGGAGGCTCGGACTAAAATTCTACTCGGCACTGCCAAAGCGCTTGCGTATTTGCACGAAGCCATTGAGCCTAAAGTGGTGCATCGTGACATTAAGTCGAGCAACATATTAATTGACGATGACTTCAACGCTAAGGTATCTGACTTTGGCCTGGCCAAGTTGCTTGGTGCTGGAAAAAGTCATGTCACGACTCGAGTTATGGGGACTTTCGGATATGTAGCTCCTGAATATGCAAATACTGGCCTTCTAAATGAGAAGAGTGATGTCTATAGCTTTGGGGTTGTGCTTCTTGAAACGATTACCGGAAGAGATCCTGTAGACTATGGACGCCCTGCACAGGAGGTAAATCTGGTGGATTGGTTAAAAATGATGGTTGGAAGCAGGCGATCAGAAGAAGTTGTTGATCCAAATATGGAGGTAAGGCCATCCACGAGAGCCTTAAAACGAGCGCTTTTGACTGCTTTGAGGTGCGTCGACCCCGATTCTGAAAAGAGACCAAAGATGGGTCAAATTGTTCGAATGCTTGATTCGGAGGAGTATCCACTACCACGAGAGGATCGAAGGCACCGGAGAACTCAAGCCAGCAGCACGGATATTGAATCGCAGAGGGAGTATTCCGATACCGACTTGGGTGAAAATCCCGTGTCAAGATCAGAAAGCAAGCGCGACGAACAAATGTAG 1554 46.27 ETIEMTNKLSDELTQKTGVFGLMVWEVIGIAVGLFIVVILSILSLCLTSRKRSRRGRDEVTQSQIPTVSKEIKEVRVEQLSAAEFVPRDGILLTIHDKSSEKGSDKVMVHLDVGKMKNGDNSSQSGSFHQFDKDGAGSQSGDEGSSGKITIYRPSSSSSYPLTAPSPLSGLPEFSHLGWGHWFTLRDLEVATNRFSKENVLGEGGYGVVYRGRLVNGTPVAVKRILNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCMEGTHRMLVYEYVNNGNLEQWLHGAMRQHGYLTWEARTKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLLETITGRDPVDYGRPAQEVNLVDWLKMMVGSRRSEEVVDPNMEVRPSTRALKRALLTALRCVDPDSEKRPKMGQIVRMLDSEEYPLPREDRRHRRTQASSTDIESQREYSDTDLGENPVSRSESKRDEQM 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5491285 5493675 + Bma000810.1 Bma01g00606 75123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00606 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 317 329 IPR008271 GO:0004672|GO:0006468
Bma01g00606 517 ProSiteProfiles Protein kinase domain profile. 195 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00606 517 MobiDBLite consensus disorder prediction 117 165 - -
Bma01g00606 517 MobiDBLite consensus disorder prediction 452 498 - -
Bma01g00606 517 SUPERFAMILY Protein kinase-like (PK-like) 179 479 IPR011009 -
Bma01g00606 517 Gene3D Phosphorylase Kinase; domain 1 177 270 - -
Bma01g00606 517 MobiDBLite consensus disorder prediction 115 165 - -
Bma01g00606 517 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 7 515 - -
Bma01g00606 517 Gene3D Transferase(Phosphotransferase) domain 1 271 482 - -
Bma01g00606 517 MobiDBLite consensus disorder prediction 452 517 - -
Bma01g00606 517 ProSitePatterns Protein kinases ATP-binding region signature. 201 223 IPR017441 GO:0005524
Bma01g00606 517 CDD STKc_IRAK 201 467 - -
Bma01g00606 517 Pfam Protein kinase domain 196 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g00606 517 PANTHER OS01G0323000 PROTEIN 7 515 - -
Bma01g00606 517 SMART serkin_6 195 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00606 Bma-Chr1:5491285 Bma05g00240 Bma-Chr5:6529823 0 dispersed
Bma01g00606 Bma-Chr1:5491285 Bma15g00184 Bma-Chr15:1925429 9.42E-96 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66256 PF00069 Pkinase 6.60E-49 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00606 - - mnt:21405451 869.766