Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00617 ATGGGTTGCGAGGGAGAGCTTCTGGTTCAAAACGTCTGCAAGTTGTACGAGCAACTCTCTAAGCTGTCAAGCCTCGAACCATCCAAAGAGGTGAACAAGCTCTTCACTGAGCTCGTCCTCGCCTGCATCCCACCAATCCCCATCGACGTAACCAAGCTCTGCGACAGGGTTCAGGAAATGAGGTCCAACCTCATTAAGCTATGTGGCGAAGCAGAGGGACATTTAGAGAGCCATTTCTCATCCATTTTAGGCTCCTTTTCAAACCCACTGGACCACCTCAATCTCTTCCCTTATTACTCAAATTATATCAAACTTGGCCTGCTTGAATTCAATATTCTCATGCAGCATTGCTCTCATTTTACGCCCAACAAAATTGCCTTCGTGGGTTCTGGCTCTCTCCCTCTTACCTCCATTGTTTTGGCCTCCAACCACCTTCCCAACGCCGTCTTTCACAATTACGACATCGATCCATTAGCCAACTCTAAGGCTTTCCGTTTAGTCTCCTCTCATCCTGATCTATCCAAGAGAGTGTTTTTCCACACCACTGACATACTCAAAGTGACAGATGACTTGAAACAGTACGATGTGGTGTTTTTAGCAGCTCTTGTTGGCATGGATAAGGAAGAAAAAGGTATAGTAATTGATCATTTGTCTAACTTCATGGCTGCTGGATCTTATCTTATGTTGAGGAGTGCTCATGGCGCTCGAGGTTTTCTCTACCCAGTGGTTGAGGCTTGTGAATTACGAGGGTTTGATGTTCTTTCTGTGTTTCATCCAACGGATGAGGTCATAAACTCTGTGGTGATTGCTCGTAAATTTTATCTGCCTTCGTCCGAGCTGCAAGAAAATCACCATGTTTTGCTGCCTAATAAGTGTTCTGAGATTCAGGTTTTTAATCCCCTTCACCGCGGGAATATGCTTGAAGATTTTGCAATTGAAGCCGACCAGCTTACCTGA 957 45.25 MGCEGELLVQNVCKLYEQLSKLSSLEPSKEVNKLFTELVLACIPPIPIDVTKLCDRVQEMRSNLIKLCGEAEGHLESHFSSILGSFSNPLDHLNLFPYYSNYIKLGLLEFNILMQHCSHFTPNKIAFVGSGSLPLTSIVLASNHLPNAVFHNYDIDPLANSKAFRLVSSHPDLSKRVFFHTTDILKVTDDLKQYDVVFLAALVGMDKEEKGIVIDHLSNFMAAGSYLMLRSAHGARGFLYPVVEACELRGFDVLSVFHPTDEVINSVVIARKFYLPSSELQENHHVLLPNKCSEIQVFNPLHRGNMLEDFAIEADQLT 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5587653 5588609 - Bma000822.1 Bma01g00617 75134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00617 318 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 89 237 IPR029063 -
Bma01g00617 318 PANTHER NICOTIANAMINE SYNTHASE 3 1 316 IPR004298 GO:0030410|GO:0030418
Bma01g00617 318 PANTHER SYNTHASE, PUTATIVE-RELATED 1 316 - -
Bma01g00617 318 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 277 IPR004298 GO:0030410|GO:0030418
Bma01g00617 318 Pfam Nicotianamine synthase protein 6 273 IPR004298 GO:0030410|GO:0030418
Bma01g00617 318 Gene3D Vaccinia Virus protein VP39 9 274 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00617 Bma-Chr1:5587653 Bma13g00601 Bma-Chr13:14215672 1.39E-144 dispersed
Bma01g00617 Bma-Chr1:5587653 Bma14g01297 Bma-Chr14:23618880 2.70E-146 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00617 K05953 - rcu:8269821 449.129