Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00625 ATGGCGACGAGGAATAGAACCTTGCTGTTTAAGAAATATAGAGATGCTTTAAAGAGCGTTAGAGTTCCGGCGAGCTCTTCCCTTGCGTCTGGTTCGCCGTCGACTTCTGGCGGTGGCGGAGGTGGTCCGGTTATCGAATTGGTCAGCACTTCGCTTTTGCATCCGAATCGATCTTATGCTCCGCTAAGTACTGAGGATCCGGGTTATTCAAGTAAGGGTGCTCTTACTGTTGGTCTACCTCCAGCTTGGGTGGATGTTTCTGAAGAAATATCAACAAATGTGCAGCGTGCACAAATAAAAATGGCCGAGTTAGCCAAGGCACATGCAAAGGCTTTAATGCCTTCATTTGGAGATGGTAAAGAAGATCAAAGATTAATTGAAGCTCTTACTCAAGAGATTACAGGTCTGATTAAAAAATCAGAGAAGAGACTACAAAGACTTTCTGTAGCAGGACCTTCTGAAGATTCCAATGTCAGAAAAAATGTTCAGCGTTCTCTTGCCACAGACCTTCAAAATCTTTCAATGGAACTTCGTAAAAAACAATCAACTTACCTCAAGCGGCTCAGGCAGCAAAAGGAGGGTCAAGATGGGATAGATTTAGAGATGAATCTAAATGGAAGTAGATCTACTGCCGAGGATGATGACTTGGATAACATGATATTTAATGAGCATCAGATGGCCAAGCTTAAAAAGAGCGAAGCATTCACAGCAGAAAGAGAGAGAGAAATCCAACAGGCAAGGGAAATAACTTTATTTACTGCTTTATTAGTTGTAGAATCTGTAAATGAGCTTGCTCAGATTATGAAGGATCTTTCAGTTCTTGTTATAGACCAGCAGGGCACAATTGTTGATAGGATTGATTACAATATTCAGAATGTGGCAACGACAGTTGAGGAGGGCCTTAAACAGCTGCAGAAGGCTGAAAGAACACAGAAACAAGGAGGGATGGTTATGTGCGCATCTGTGCTTCTTATCATGTGCTTCATCATGTTGGTTCTCCTGGTTCTCAAGGAAATATTTTTG 1023 42.13 MATRNRTLLFKKYRDALKSVRVPASSSLASGSPSTSGGGGGGPVIELVSTSLLHPNRSYAPLSTEDPGYSSKGALTVGLPPAWVDVSEEISTNVQRAQIKMAELAKAHAKALMPSFGDGKEDQRLIEALTQEITGLIKKSEKRLQRLSVAGPSEDSNVRKNVQRSLATDLQNLSMELRKKQSTYLKRLRQQKEGQDGIDLEMNLNGSRSTAEDDDLDNMIFNEHQMAKLKKSEAFTAEREREIQQAREITLFTALLVVESVNELAQIMKDLSVLVIDQQGTIVDRIDYNIQNVATTVEEGLKQLQKAERTQKQGGMVMCASVLLIMCFIMLVLLVLKEIFL 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5664506 5667926 - Bma030197 Bma01g00625 75142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00625 341 SMART SynN_4 74 189 IPR006011 GO:0016020
Bma01g00625 341 PANTHER SYNTAXIN-43-LIKE 1 336 - -
Bma01g00625 341 MobiDBLite consensus disorder prediction 24 46 - -
Bma01g00625 341 Gene3D - 80 299 - -
Bma01g00625 341 PANTHER SYNTAXIN 1 336 IPR045242 -
Bma01g00625 341 CDD SNARE_syntaxin16 237 306 - -
Bma01g00625 341 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 276 307 IPR000727 -
Bma01g00625 341 SUPERFAMILY t-snare proteins 79 300 IPR010989 GO:0016020|GO:0016192
Bma01g00625 341 Pfam SNARE domain 281 333 IPR000727 -
Bma01g00625 341 SMART tSNARE_6 240 307 IPR000727 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00625 Bma-Chr1:5664506 Bma05g00265 Bma-Chr5:7471511 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00625 K08489 - jre:109011309 529.25