Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00647 ATGATGAAGCTTTTATGGATTGGATCTTTAATCCTGCTGTTTTTAGGCAAATGGGTTAATGGGTTTCTACTGTGTAACGAAACAGAGCAATCTTTTTTTGATTCTCACGGAGTTGCCGGAGCTACTCCTACTAATAAATCTTCAAGTGTTCTTCTCACTCTCATTCAAGGCGCTGCTGCAAAAGGAGCGGTCTGCCTAGATGGGACTTTACCTGGCTATCACCTAGATCCAGGACATGGAACAGGAGCACATAATTGGCTCATTCAATTGGAGGGAGGTGGATGGTGTAACAACATTAGAAGTTGTGTCTTTCGAAAAAGTACACCACGTGGATCATCAACATTCATGGAAAAAGAGATTATTTTTACAGGAATATTGAGCAAATATCCCTCCGACAATCCTGATTTTTACAGTTGGAATAGAGTAAAGCTTCGCTACTGCGATGGGGCCTCTTTTCTGGGGGATGGCAAAATTAAGAGAGCACAATTACAATTCAGAGGACAGCGCATATTGTTGGCTGCTATGGATGAGCTGATGTCGAAGGGAATGCGTTTTGCCAAGCAGGCTCTTCTTTCAGGCTGCTCTGCTGGAGGGTTGGCGTCTATTATGCACTGCGATGAATTTCGAGGCTTATTCCCACCAACCACCACAGTGAAGTGCCTCAGTGATGCTGGCCTATTTCTTGATGCGGCTGATGTGTCTGGAACTCGTTATATTAGGAGTTTTTTTGGCGATGTCGTGACTTTGCAGCGTGCCGGGAAGAATTTGCCGACCACTTGTACAAACCATCTCGATCCAACCTCGTGCTTCTTCCCCCAAAATGTGATTGCTGGAATTCAAACCCCATTATTTCTTCTTAATTCAGCCTATGATATATGGCAGATCGTAGAAAGTTTGACTCGGCCATCTGCAGATCCGCATGGATACTGGAAATATTGCAGATACAACCATTCGGCTTGTTCCCGATCACAAATTCAATTTCTGCAACAATTCAGGCATCAAATGTTAAACGCAATAGAGGACTTCTCAAAGTGGACTAAAAATGGGCTGTTTATAAATTCATGTTTTGCTCATTGCCAAACCGAGATCCAAGAGACGTGGTTTTCACATGGTTCTCCATCTATTGGAAAGAAGGCAATTGCAGTGGCTGTTGGAGATTGGTATTTTGAGAGAGCAGCTGTTAAGGTCATTGATTGTCCCTACCCTTGTGATAAGACTTGCAACCATTTTGCTTCCAGAAGAAACTAG 1248 43.35 MMKLLWIGSLILLFLGKWVNGFLLCNETEQSFFDSHGVAGATPTNKSSSVLLTLIQGAAAKGAVCLDGTLPGYHLDPGHGTGAHNWLIQLEGGGWCNNIRSCVFRKSTPRGSSTFMEKEIIFTGILSKYPSDNPDFYSWNRVKLRYCDGASFLGDGKIKRAQLQFRGQRILLAAMDELMSKGMRFAKQALLSGCSAGGLASIMHCDEFRGLFPPTTTVKCLSDAGLFLDAADVSGTRYIRSFFGDVVTLQRAGKNLPTTCTNHLDPTSCFFPQNVIAGIQTPLFLLNSAYDIWQIVESLTRPSADPHGYWKYCRYNHSACSRSQIQFLQQFRHQMLNAIEDFSKWTKNGLFINSCFAHCQTEIQETWFSHGSPSIGKKAIAVAVGDWYFERAAVKVIDCPYPCDKTCNHFASRRN 415
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5828563 5833193 + Bma000853.1 Bma01g00647 75164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00647 415 PANTHER NOTUM-RELATED 46 408 IPR004963 GO:0016787
Bma01g00647 415 PANTHER PECTIN ACETYLESTERASE 2 46 408 - -
Bma01g00647 415 Pfam Pectinacetylesterase 46 392 IPR004963 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00647 Bma-Chr1:5828563 Bma12g00626 Bma-Chr12:27503088 3.76E-141 dispersed
Bma01g00647 Bma-Chr1:5828563 Bma05g00898 Bma-Chr5:46826758 1.15E-145 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00647 K19882 - twl:120008931 590.882