Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00684 ATGGGTGAACTTCTAATCTCAACTGTCATCTTTGTTTTTGCCCTACTGTCGAGCATTTTGCTGAGAAATGGGAAGAAAAAACCCTACAACAGATCAGATAAGCTTCCGCCTGGTTCAATGGGTTGGCCTTGTATTGGAGAGACCCTTCAGCTCTACTCTCAAGACCCAAACATTTTCTTTGCTGCCAAACAGAAAAGGTTAACTCTCTCCGACCGCGTTTTGTGTTCGAGAAAATTAAGAATATGCACTGTTTCTAATCCTTTTTTGTTGATTAGATTTGGAGAAATCTTTAAGACCCATATTCTTGGCTGCCCCTGTGTGATGCTTGCCAGCCCTGAAGCTGCTCGGTTTGTGCTGGTTAGCCAGGCTCACCTGTTCAAACCCACGTATCCAAAGAGCAAGGAGCTTTTGATTGGCGAATCTGCTCTGTTTTTCCACCAAGGCGACCGCCATTTTCGTCTGAGAAAGCTGGTCCAGAGCTCATTATCGTTGGAAGCTATTAGAAACTTGGTCCCTCATCTTGACGCCTTGGCAGCCTCAGCTTTGGAATCTTTGGCAAGTGGGAAAGTCGTCAGCACTTTTGAAGAGCTTAAAAATTACTCTTTTGAAGTTGGGATACTGGCAATTTTTGGCCATTTGGAAGGTCGTCATAAAGAAATGCTGAAAGCAAATTACTGTATAGTCAATAAAGGCTACAATTCTTTCCCTACAATCATACCAGGAACGCCATACAAGAAGGCTTTATCAGCAAGGAAGAGACTGAGTGAGATTCTGGCTGATATAATAAGAGAGAGAAAGGAGAAGAGAGTAGAACAGAAGGATCTCTTGGGTTGCTTATTGAGCTCGAAGAATGAAAAAGGAGAAATTTTGAGTGATGCCCAGATTTCAGATAACATCATCGGAGTTCTTTTTGCTGCTCATGACACTTCTGCTAGTGTTCTTACTTGGATTATCAAGTACCTCCACGATGATCCCAAACTTCTAGAAGCTGTAAAAGTTGAACATAGAGCAATTGCAGCAGCAAACAGCGTAGCTAACCAGCCACTGAGTTGGTCTGACACCAGAAACATGCCCATCAGCCGGAAGGTCGTGTTGGAGAGTTTGAGAATGGCCAGTGTTATATCTTTCACTTTCAGGGAGGCAGTTGCCGACGTTGAATACAAGGGTAATAATGAATATTATCATTTAATTTTTAATTTTCTTAGCTTTTATAATTATTATTTAATTTTTCCACCAGGATATCTAATTCCAAAAGGCTGGAAAGTCATGCCTCTTTTCCGGAATATCCATCATAGTCCTCAATACTTCACAGATCCTCATAAATTCGAGCCTTCGAGATTTGAGGTTGGACCCAAGCCCAATACATTTATGCCATTCGGTAACGGAGTTCATGCCTGTCCCGGAAGCCAGCTTGCCAAGACGGAGATCCTACTTATGATCCATCATCTCGTCACCAAGTTTAGGTGGGAAATCGTAGGATCAGAAGTTGGGGTTCAGTATGGCCCATTTCCCGTGCCATTAAATGGTCTCCCAGCCCAATTTTGGAAATTGCCTTCTTGCTAA 1563 42.67 MGELLISTVIFVFALLSSILLRNGKKKPYNRSDKLPPGSMGWPCIGETLQLYSQDPNIFFAAKQKRLTLSDRVLCSRKLRICTVSNPFLLIRFGEIFKTHILGCPCVMLASPEAARFVLVSQAHLFKPTYPKSKELLIGESALFFHQGDRHFRLRKLVQSSLSLEAIRNLVPHLDALAASALESLASGKVVSTFEELKNYSFEVGILAIFGHLEGRHKEMLKANYCIVNKGYNSFPTIIPGTPYKKALSARKRLSEILADIIRERKEKRVEQKDLLGCLLSSKNEKGEILSDAQISDNIIGVLFAAHDTSASVLTWIIKYLHDDPKLLEAVKVEHRAIAAANSVANQPLSWSDTRNMPISRKVVLESLRMASVISFTFREAVADVEYKGNNEYYHLIFNFLSFYNYYLIFPPGYLIPKGWKVMPLFRNIHHSPQYFTDPHKFEPSRFEVGPKPNTFMPFGNGVHACPGSQLAKTEILLMIHHLVTKFRWEIVGSEVGVQYGPFPVPLNGLPAQFWKLPSC 520
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6291672 6293746 + Bma000894.1 Bma01g00684 75201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00684 520 SUPERFAMILY Cytochrome P450 33 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00684 520 Pfam Cytochrome P450 92 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00684 520 Pfam Cytochrome P450 412 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00684 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Bma01g00684 520 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00684 520 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00684 520 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00684 520 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00684 520 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00684 520 PRINTS E-class P450 group I signature 425 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00684 520 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 413 516 - -
Bma01g00684 520 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 9 389 - -
Bma01g00684 520 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00684 520 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00684 520 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00684 520 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00684 520 Gene3D Cytochrome P450 25 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g00684 520 PANTHER CYTOCHROME P450 26 413 516 - -
Bma01g00684 520 PANTHER CYTOCHROME P450 26 9 389 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00684 Bma-Chr1:6291672 Bma12g00454 Bma-Chr12:11694491 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00684 K09843 - pop:7462884 681.789